WormBase Tree Display for Gene: WBGene00101853

WBGene00101853 SMap: S_parent: Sequence: PPA_ChrI
  Identity: Version: 3
    Name: CGC_name: Ppa-elt-2 From_analysis: Inferred_from_orthology
      Sequence_name: PPA12299
      Molecular_name: PPA12299
        PPA12299.1
        PP51063
      Other_name: GENEPREDICTION_SNAP300000068753
        GENEPREDICTION_SNAP300000080668
        UMM-S57-3.15 Person_evidence: WBPerson606
      Public_name: Ppa-elt-2
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:05 WBPerson4055 Event: Imported: from NGASP
        2 24 Nov 2017 09:46:51 WBPerson4055 Event: Acquires_merge: WBGene00113336
        3 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Ppa-elt-2
      Acquires_merge: WBGene00113336
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: elt
    RNASeq_FPKM: WBls:0000032 3.00941 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 2.18782 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        3.00941 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        3.55404 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00178826
      00178827
      00178828
    Ortholog (29)
    Paralog: WBGene00089767 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00091094 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00273964 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276968 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable sequence-specific DNA binding activity and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans elt-2 and elt-4. In C. elegans, elt-2 is involved in several processes, including defense response to other organism; determination of adult lifespan; and nematode larval development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA12299
    Corresponding_transcript: PPA12299.1
    Other_sequence (23)
  Experimental_info: Microarray_results: GPL14372_Probes_68912
      GPL14372_Probes_68913
      GPL14372_Probes_68914
      GPL14372_Probes_68915
      GPL14372_Probes_68917
      GPL14372_Probes_68918
      GPL14372_Probes_68919
      GPL14372_Probes_68920
      GPL14372_Probes_68921
    Expression_cluster: WBPaper00041466:PP_germline-ablation_regulated
  Method: Gene