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WormBase Tree Display for Gene: WBGene00101989

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Name Class

WBGene00101989SMapS_parentSequencePPA_ChrV
IdentityVersion1
NameSequence_namePPA12435
Molecular_namePPA12435
PPA12435.1
PP31888
Other_nameGENEPREDICTION_SNAP300000068887
UMM-S13-27.6Person_evidenceWBPerson606
Public_namePPA12435
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000003211.5467From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
3.8489From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00178883
Ortholog (22)
ParalogWBGene00096342Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00104924Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00112178Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00118201Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00274467Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00278303Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00304273Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00304410Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be located in endoplasmic reticulum membrane. Is an ortholog of C. elegans W08E3.4.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA12435
Corresponding_transcriptPPA12435.1
Experimental_infoMicroarray_resultsGPL14372_Probes_56711
GPL14372_Probes_56712
GPL14372_Probes_56713
GPL14372_Probes_56714
GPL14372_Probes_56715
Expression_clusterWBPaper00064862:Ppa-sul-2(tu1069)_4M1_Up
WBPaper00041207:PP_dauer_up
WBPaper00041466:PP_germline-ablation_regulated
MethodGene