WormBase Tree Display for Gene: WBGene00102126

WBGene00102126 SMap: S_parent: Sequence: PPA_ChrI
  Identity: Version: 4
    Name: CGC_name: Ppa-serr-1.2 From_analysis: Inferred_from_orthology
      Sequence_name: PPA12572
      Molecular_name: PPA12572
        PPA12572.1
        PP29208
      Other_name: GENEPREDICTION_SNAP300000069433
        UMM-S71-38.39 Person_evidence: WBPerson606
      Public_name: Ppa-serr-1.2
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:05 WBPerson4055 Event: Imported: from NGASP
        2 04 Jun 2020 14:38:22 WBPerson1983 Name_change: CGC_name: Ppa-serr-1.2
        3 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        4 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Ppa-serr-1.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: serr
    RNASeq_FPKM: WBls:0000032 30.9099 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 10.3033 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Ortholog: WBGene00011353 Caenorhabditis elegans From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00033458 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00034453 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00064238 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00069444 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00072952 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00153513 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00143884 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00162480 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00225751 Brugia malayi From_analysis: WormBase-Compara
      WBGene00237057 Onchocerca volvulus From_analysis: WormBase-Compara
      CBOVI.g12079 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g12408 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g1689 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g2260 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP32.g7707 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP32.g7708 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g13135 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g4448 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g24343 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00682.g13401 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_I.g2323 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_IV.g12244 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold479.g1814 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp11.Scaffold630.g20444 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01259.g19642 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_07049 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_07201 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_012687 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_012690 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g06887 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g16592 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10315000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g1615 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00164984 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00261718 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00290656 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00097342 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00093266 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00095170 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00098732 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00098733 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00098734 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00099535 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00104153 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00108480 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00110389 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00112373 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00116091 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00118172 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00274847 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279505 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00284026 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Tryptophan synthase beta subunit-like PLP-dependent enzyme and Pyridoxal-phosphate dependent enzyme. Is an ortholog of C. elegans serr-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA12572
    Corresponding_transcript: PPA12572.1
    Other_sequence: ASC26185_1
      AS04806
      PPC16778_1
      Oden_isotig12018
      PPC17205_1
      XI05192
      XIC04314_1
      Oden_isotig12019
      FE907080.1
      JI211337.1
  Experimental_info: Microarray_results: GPL14372_Probes_10621
      GPL14372_Probes_10622
      GPL14372_Probes_10623
      GPL14372_Probes_10624
      GPL14372_Probes_10625
    Expression_cluster: WBPaper00041207:PP_dauer_down
      WBPaper00041606:PP_X.nematophila_regulated
  Remark: [210528 pad] The CGC name Ppa-serr-1.2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene