WormBase Tree Display for Gene: WBGene00104331

WBGene00104331 SMap: S_parent: Sequence: PPA_ChrII
  Identity: Version: 2
    Name: CGC_name: Ppa-ttb-1.2 From_analysis: Inferred_from_orthology
      Sequence_name: PPA14777
      Molecular_name: PPA14777
        PPA14777.1
        PP61570
      Other_name: GENEPREDICTION_SNAP300000071547
        UMA-S10-72.16 Person_evidence: WBPerson606
      Public_name: Ppa-ttb-1.2
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:05 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Ppa-ttb-1.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ttb
    RNASeq_FPKM: WBls:0000032 7.44675 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 13.1936 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        6.88012 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        7.44675 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
    GO_annotation: 00179859
      00179860
      00179861
    Ortholog: WBGene00006648 Caenorhabditis elegans From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00028713 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00062172 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00082455 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00153165 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00120121 Caenorhabditis japonica From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00151269 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00234136 Brugia malayi From_analysis: WormBase-Compara
      WBGene00243613 Onchocerca volvulus From_analysis: WormBase-Compara
      CBOVI.g1516 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g15753 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g16488 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g21998 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g117 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g16216 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g14328 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g16033 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g3766 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g38 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00042.g2280 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_07797.g21116 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_V.g18328 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_V.g18329 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g7597 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00417.g11066 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_01600.g21984 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_05421 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_15245 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_019095 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_019097 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_019149 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g05244 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g20270 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40071400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g12946 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00256088 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00297480 Trichuris muris From_analysis: WormBase-Compara
      WBGene00298037 Trichuris muris From_analysis: WormBase-Compara
      WBGene00299814 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00117680 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00112176 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable TBP-class protein binding activity. Predicted to be involved in transcription preinitiation complex assembly. Is an ortholog of C. elegans ttb-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA14777
    Corresponding_transcript: PPA14777.1
    Other_sequence: CR03710
      EX013250.1
      FG349430.1
      MI05478
      PPC09354_1
      HBC28161_1
      MIC04316_1
      Tcir_isotig03071
      Hbac_isotig02918
  Experimental_info: Microarray_results: GPL14372_Probes_19405
      GPL14372_Probes_58761
  Method: Gene