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WormBase Tree Display for Gene: WBGene00105310

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WBGene00105310	SMap	S_parent	Sequence	PPA_ChrI
	Identity	Version	7
		Name	CGC_name	Ppa-acin-1.2	From_analysis	Inferred_from_orthology
			Sequence_name	PPA15756
			Molecular_name	PPA15756
				PPA15756.1
				PP58952
			Other_name	GENEPREDICTION_SNAP300000072185
				Ppa-cogc-5
				GENEPREDICTION_SNAP300000082912
				UMM-S469-0.41	Person_evidence	WBPerson606
				Ppa-lin-40	From_analysis	Inferred_from_orthology
				Ppa-acin-1	From_analysis	Inferred_from_orthology
			Public_name	Ppa-acin-1.2
		Species	Pristionchus pacificus
		History	Version_change	1	06 Aug 2008 09:05:05	WBPerson4055	Event	Imported	from NGASP
				2	24 Nov 2017 09:46:51	WBPerson4055	Event	Acquires_merge	WBGene00115616
				3	20 Mar 2018 10:26:13	WBPerson4025	Name_change	CGC_name	Ppa-acin-1.2
								Other_name	Ppa-lin-40
				4	08 Feb 2019 15:42:26	WBPerson1983	Name_change	CGC_name	Ppa-acin-1
								Other_name	Ppa-acin-1.2
				5	08 May 2019 10:09:28	WBPerson1983	Name_change	CGC_name	Ppa-acin-1.2
								Other_name	Ppa-acin-1
				6	28 May 2021 19:05:19	WBPerson1983	Name_change	CGC_name	Ppa-acin-1
								Other_name	Ppa-acin-1.2
				7	28 Jul 2021 11:12:29	WBPerson1983	Name_change	CGC_name	Ppa-acin-1.2
								Other_name	Ppa-acin-1
			Acquires_merge	WBGene00115616
		Status	Live
	Gene_info	Biotype	SO:0001217
		Gene_class	acin
		RNASeq_FPKM	WBls:0000032	1.66789	From_analysis	RNASeq.pristionchus.WBls:0000032.control_mean
						RNASeq.pristionchus.WBls:0000032.control_median
						RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
			WBls:0000101	0.555963	From_analysis	RNASeq.pristionchus.total_over_all_stages.control_mean
				0	From_analysis	RNASeq.pristionchus.total_over_all_stages.control_median
						RNASeq.pristionchus.WBls:0000101.control_mean
						RNASeq.pristionchus.WBls:0000101.control_median
						RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
		GO_annotation	00180287
			00180288
			00180289
		Ortholog	WBGene00016601	Caenorhabditis elegans	From_analysis	OMA
						Inparanoid_8
			WBGene00033102	Caenorhabditis briggsae	From_analysis	OMA
						Inparanoid_8
			WBGene00062381	Caenorhabditis remanei	From_analysis	OMA
						Inparanoid_8
			WBGene00141250	Caenorhabditis brenneri	From_analysis	OMA
						Inparanoid_8
			WBGene00226303	Brugia malayi	From_analysis	WormBase-Compara
			WBGene00249034	Onchocerca volvulus	From_analysis	WormBase-Compara
			Pan_g19824	Panagrellus redivivus	From_analysis	WormBase-Compara
			WBGene00258633	Strongyloides ratti	From_analysis	WormBase-Compara
			WBGene00285895	Trichuris muris	From_analysis	WormBase-Compara
		Paralog	WBGene00099503	Pristionchus pacificus	From_analysis	WormBase-Compara
		Structured_description	Automated_description	Predicted to enable chromatin binding activity and sequence-specific DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans acin-1. In C. elegans, acin-1 is involved in gonad morphogenesis and regulation of cell migration.	Paper_evidence	WBPaper00065943
					Curator_confirmed	WBPerson324
						WBPerson37462
					Inferred_automatically	This description was generated automatically by a script based on data from the WS291 version of WormBase
					Date_last_updated	29 Nov 2023 00:00:00
	Molecular_info	Corresponding_CDS	PPA15756
		Corresponding_transcript	PPA15756.1
		Other_sequence (47)
	Experimental_info	Microarray_results	GPL14372_Probes_48510
			GPL14372_Probes_48512
			GPL14372_Probes_48513
			GPL14372_Probes_48514
			GPL14372_Probes_48515
			GPL14372_Probes_48516
			GPL14372_Probes_48518
			GPL14372_Probes_48519
			GPL14372_Probes_48520
		Expression_cluster	WBPaper00041207:PP_dauer_up
	Method	Gene