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WormBase Tree Display for Gene: WBGene00106337

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Name Class

WBGene00106337SMapS_parentSequencePPA_ChrIV
IdentityVersion2
NameCGC_namePpa-swd-2.2From_analysisInferred_from_orthology
Sequence_namePPA16783
Molecular_namePPA16783
PPA16783.1
PP73669
Other_nameGENEPREDICTION_SNAP300000073508
UMM-S2847-2.53Person_evidenceWBPerson606
Public_namePpa-swd-2.2
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:10WBPerson4025Name_changeCGC_namePpa-swd-2.2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classswd
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
20.5541From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
6.85137From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
Ortholog (64)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: WD domain, G-beta repeat; WD40-repeat-containing domain superfamily; WD40/YVTN repeat-like-containing domain superfamily; WD40 repeat; and COMPASS component Swd2/WDR82. Is an ortholog of C. elegans swd-2.2. In C. elegans, swd-2.2 is involved in programmed cell death.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA16783
Corresponding_transcriptPPA16783.1
Other_sequence (36)
Experimental_infoMicroarray_resultsGPL14372_Probes_76531
GPL14372_Probes_76532
GPL14372_Probes_76533
GPL14372_Probes_76534
Expression_clusterWBPaper00041207:PP_dauer_up
WBPaper00041466:PP_germline-ablation_regulated
WBPaper00041606:PP_X.nematophila_regulated
MethodGene