WormBase Tree Display for Gene: WBGene00106943

WBGene00106943 SMap: S_parent: Sequence: PPA_ChrI
  Identity: Version: 3
    Name: Sequence_name: PPA17389
      Molecular_name: PPA17389
        PPA17389.1
        PP64252
      Other_name: GENEPREDICTION_SNAP300000074084
        UMA-S207-14.35 Person_evidence: WBPerson606
      Public_name: PPA17389
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:05 WBPerson4055 Event: Imported: from NGASP
        2 18 Nov 2010 11:54:45 WBPerson2970 Name_change: CGC_name: Ppa-ostd-1
        3 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Removed
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000032 9.39205 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 5.97459 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        8.53172 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00181022
      00181023
      00181024
      00181025
    Ortholog (43)
    Paralog: WBGene00092059 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00097170 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00097171 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00114305 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276304 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277140 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00280582 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00281676 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be a structural constituent of ribosome. Predicted to be involved in protein N-linked glycosylation. Predicted to be located in membrane. Predicted to be part of oligosaccharyltransferase complex. Is an ortholog of C. elegans acs-11 and acs-21. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA17389
    Corresponding_transcript: PPA17389.1
    Other_sequence (104)
  Experimental_info: Microarray_results (18)
    Expression_cluster: WBPaper00041207:PP_dauer_up
      WBPaper00041466:PP_germline-ablation_regulated
  Remark: [180319 gw3] The CGC name Ppa-ostd-1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson4025
  Method: Gene