WormBase Tree Display for Gene: WBGene00107310

WBGene00107310 SMap: S_parent: Sequence: PPA_ChrI
  Identity: Version: 6
    Name: CGC_name: Ppa-pcdr-1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA17756
      Molecular_name: PPA17756
        PPA17756.1
        PP54821
      Other_name: GENEPREDICTION_SNAP300000074449
        GENEPREDICTION_SNAP300000074451
        UMM-S7-51.32 Person_evidence: WBPerson606
      Public_name: Ppa-pcdr-1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:05 WBPerson4055 Event: Imported: from NGASP
        2 24 Nov 2017 09:46:50 WBPerson4055 Event: Acquires_merge: WBGene00107312
        3 24 Nov 2017 09:46:52 WBPerson4055 Event: Acquires_merge: WBGene00204118
        4 01 Oct 2019 10:47:49 WBPerson1983 Name_change: CGC_name: Ppa-pcdr-1
        5 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        6 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Ppa-pcdr-1
      Acquires_merge: WBGene00107312
        WBGene00204118
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pcdr
    RNASeq_FPKM: WBls:0000032 3.0863 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 2.24368 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        3.0863 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        3.64473 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00181229
    Ortholog (29)
    Paralog (14)
    Structured_description: Automated_description: Predicted to be located in membrane. Is an ortholog of C. elegans pcdr-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA17756
    Corresponding_transcript: PPA17756.1
    Other_sequence (25)
  Experimental_info: Microarray_results: GPL14372_Probes_8513
      GPL14372_Probes_8514
      GPL14372_Probes_53360
      GPL14372_Probes_53361
      GPL14372_Probes_53362
      GPL14372_Probes_53365
      GPL14372_Probes_53367
      GPL14372_Probes_53368
      GPL14372_Probes_53370
    Expression_cluster: WBPaper00041207:PP_dauer_up
      WBPaper00041466:PP_germline-ablation_regulated
  Remark: [210528 pad] The CGC name Ppa-pcdr-1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene