WormBase Tree Display for Gene: WBGene00107441
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| WBGene00107441 | SMap | S_parent | Sequence | PPA_ChrIII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 9 | |||||||
| Name | CGC_name | Ppa-grp-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA17887 | ||||||||
| Molecular_name | PPA17887 | ||||||||
| PPA17887.1 | |||||||||
| PP67440 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000074590 | ||||||||
| GENEPREDICTION_SNAP300000074591 | |||||||||
| UMM-S2874-5.19 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-grp-1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00107442 | ||||
| 3 | 08 Feb 2019 15:42:28 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 08 May 2019 10:09:23 | WBPerson1983 | Name_change | CGC_name | Ppa-vms-1 | ||||
| 5 | 01 Oct 2019 10:47:49 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 27 Nov 2019 12:48:14 | WBPerson1983 | Name_change | CGC_name | Ppa-grp-1 | ||||
| 7 | 04 Feb 2020 15:43:56 | WBPerson1983 | Name_change | CGC_name | Ppa-vms-1 | ||||
| Other_name | Ppa-grp-1 | ||||||||
| 8 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 9 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Ppa-grp-1 | ||||
| Acquires_merge | WBGene00107442 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | grp | ||||||||
| RNASeq_FPKM | WBls:0000032 | 1.71228 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 1.71228 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| 1.91881 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| 4.04416 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00181306 | ||||||||
| 00181307 | |||||||||
| 00181308 | |||||||||
| 00181309 | |||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00096831 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| WBGene00101375 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00110649 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00276948 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00281507 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable guanyl-nucleotide exchange factor activity and isopentenyl-diphosphate delta-isomerase activity. Predicted to be involved in isoprenoid biosynthetic process and regulation of ARF protein signal transduction. Is an ortholog of C. elegans grp-1. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA17887 | |||||||
| Corresponding_transcript | PPA17887.1 | ||||||||
| Other_sequence (24) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_73106 | |||||||
| GPL14372_Probes_73107 | |||||||||
| GPL14372_Probes_73108 | |||||||||
| GPL14372_Probes_73109 | |||||||||
| GPL14372_Probes_73110 | |||||||||
| GPL14372_Probes_73112 | |||||||||
| GPL14372_Probes_73113 | |||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_down | ||||||||
| WBPaper00041466:PP_germline-ablation_regulated | |||||||||
| Remark | [190208 pad] The CGC name Ppa-grp-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [191001 pad] The CGC name Ppa-vms-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| [210528 pad] The CGC name Ppa-vms-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Removed duplicate Other_name Ppa-grp-1 | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
