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WormBase Tree Display for Gene: WBGene00108640

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Name Class

WBGene00108640SMapS_parentSequencePPA_ChrI
IdentityVersion1
NameSequence_namePPA19086
Molecular_namePPA19086
PPA19086.1
PP73858
Other_nameGENEPREDICTION_SNAP300000075905
UMM-S71-30.35Person_evidenceWBPerson606
Public_namePPA19086
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000003212.2261From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010112.2261From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
15.288From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
9.17137From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
Ortholog (31)
ParalogWBGene00099943Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: SAM-dependent methyltransferase TRM5/TYW2-type; Leucine-rich repeat domain superfamily; S-adenosyl-L-methionine-dependent methyltransferase; and Met-10+ like-protein. Is an ortholog of C. elegans C53A5.17.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA19086
Corresponding_transcriptPPA19086.1
Other_sequence (12)
Experimental_infoMicroarray_resultsGPL14372_Probes_82961
GPL14372_Probes_82962
GPL14372_Probes_82965
GPL14372_Probes_82966
Expression_clusterWBPaper00041207:PP_dauer_down
WBPaper00041466:PP_germline-ablation_regulated
WBPaper00041606:PP_X.nematophila_regulated
MethodGene