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WormBase Tree Display for Gene: WBGene00109386

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Name Class

WBGene00109386SMapS_parentSequencePPA_ChrIII
IdentityVersion2
NameSequence_namePPA19832
Molecular_namePPA19832
PPA19832.1
PP56862
Other_nameGENEPREDICTION_SNAP300000076648
UMM-S341-2.6Person_evidenceWBPerson606
Public_namePPA19832
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000329.04935From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001014.57489From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
4.67531From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Ortholog (24)
ParalogWBGene00112922Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Armadillo-type fold; Exportin-1/Importin-beta-like; Armadillo-like helical; RNA polymerase II assembly factor Rtp1, C-terminal; Exportin 1-like protein; TANGO6/Rtp1; and Required for nuclear transport of RNA pol II C-terminus 1. Is an ortholog of C. elegans T16G12.6.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA19832
Corresponding_transcriptPPA19832.1
Other_sequence (13)
Experimental_infoMicroarray_resultsGPL14372_Probes_66541
GPL14372_Probes_66542
GPL14372_Probes_66543
GPL14372_Probes_66545
GPL14372_Probes_66546
GPL14372_Probes_66547
GPL14372_Probes_66548
GPL14372_Probes_66549
GPL14372_Probes_66551
GPL14372_Probes_66552
Expression_clusterWBPaper00041207:PP_dauer_up
WBPaper00041466:PP_germline-ablation_regulated
Remark[180319 gw3] The CGC name Ppa-ekl-6 was deleted as there was no evidence to support it.Curator_confirmedWBPerson4025
MethodGene