WormBase Tree Display for Gene: WBGene00109458

WBGene00109458 SMap: S_parent: Sequence: PPA_ChrIII
  Identity: Version: 5
    Name: CGC_name: Ppa-rme-2 From_analysis: Inferred_from_orthology
      Sequence_name: PPA19904
      Molecular_name: PPA19904
        PPA19904.1
        PP58989
      Other_name: GENEPREDICTION_SNAP300000076720
        UMM-S66-1.0 Person_evidence: WBPerson606
        Ppa-rme-2.2 From_analysis: Inferred_from_orthology
      Public_name: Ppa-rme-2
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:06 WBPerson4055 Event: Imported: from NGASP
        2 08 May 2019 10:09:28 WBPerson1983 Name_change: CGC_name: Removed
        3 01 Oct 2019 10:47:49 WBPerson1983 Name_change: CGC_name: Ppa-rme-2
        4 04 Jun 2020 14:38:22 WBPerson1983 Name_change: CGC_name: Ppa-rme-2.2
                Other_name: Ppa-rme-2
        5 28 May 2021 19:05:19 WBPerson1983 Name_change: CGC_name: Ppa-rme-2
                Other_name: Ppa-rme-2.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rme
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        23.0816 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        7.69387 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
    GO_annotation: 00182289
    Ortholog (48)
    Paralog (11)
    Structured_description: Automated_description: Predicted to enable calcium ion binding activity. Is an ortholog of C. elegans rme-2. In C. elegans, rme-2 is involved in embryo development; oocyte development; and ovulation. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA19904
    Corresponding_transcript: PPA19904.1
    Other_sequence: PPC01423_1
      CJC04089_1
      AJ616454.1
      PP00034
      PP00002
      PPC05127_1
      CBC00869_1
      Hbac_isotig01555
      PPC17832_1
      TIC00333_1
  Experimental_info: Microarray_results: GPL14372_Probes_66890
      GPL14372_Probes_66891
      GPL14372_Probes_66892
      GPL14372_Probes_66893
      GPL14372_Probes_66895
    Expression_cluster: WBPaper00041207:PP_dauer_up
      WBPaper00041466:PP_germline-ablation_regulated
      WBPaper00041606:PP_X.nematophila_regulated
  Remark: [190507 pad] The CGC name Ppa-rme-2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene