WormBase Tree Display for Gene: WBGene00110120
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| WBGene00110120 | SMap | S_parent | Sequence | PPA_ChrX | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 5 | |||||||
| Name | CGC_name | Ppa-tyra-2 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA20566 | ||||||||
| Molecular_name | PPA20566 | ||||||||
| PPA20566.1 | |||||||||
| PP55853 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000079659 | ||||||||
| UMM-S2845-8.0 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-tyra-2 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:06 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 08 Feb 2019 15:42:27 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 3 | 08 May 2019 10:09:23 | WBPerson1983 | Name_change | CGC_name | Ppa-tyra-2 | ||||
| 4 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 5 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Ppa-tyra-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tyra | ||||||||
| RNASeq_FPKM | WBls:0000032 | 13.9975 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 4.66583 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| GO_annotation | 00182593 | ||||||||
| 00182594 | |||||||||
| 00182595 | |||||||||
| Ortholog (28) | |||||||||
| Paralog (14) | |||||||||
| Structured_description | Automated_description | Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Is an ortholog of C. elegans tyra-2. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA20566 | |||||||
| Corresponding_transcript | PPA20566.1 | ||||||||
| Other_sequence | JI227792.1 | ||||||||
| Acan_isotig12515 | |||||||||
| Oden_isotig29509 | |||||||||
| Oden_isotig28023 | |||||||||
| Dviv_isotig25227 | |||||||||
| JI224343.1 | |||||||||
| JI221162.1 | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_74805 | |||||||
| GPL14372_Probes_74806 | |||||||||
| GPL14372_Probes_74808 | |||||||||
| GPL14372_Probes_74809 | |||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_up | ||||||||
| WBPaper00041466:PP_germline-ablation_regulated | |||||||||
| Remark | [190208 pad] The CGC name Ppa-tyra-2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Ppa-tyra-2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
