WormBase Tree Display for Gene: WBGene00111046

WBGene00111046 SMap: S_parent: Sequence: PPA_ChrIV
  Identity: Version: 4
    Name: CGC_name: Ppa-fln-1
      Sequence_name: PPA21492
      Molecular_name: PPA21492
        PPA21492.1
        PP61480
      Other_name: GENEPREDICTION_SNAP300000078238
        GENEPREDICTION_SNAP300000078239
        UMM-S2838-38.79 Person_evidence: WBPerson606
      Public_name: Ppa-fln-1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:06 WBPerson4055 Event: Imported: from NGASP
        2 18 Nov 2010 11:54:47 WBPerson2970 Name_change: CGC_name: Ppa-fln-1
        3 24 Nov 2017 09:46:50 WBPerson4055 Event: Acquires_merge: WBGene00111047
        4 24 Nov 2017 09:46:52 WBPerson4055 Event: Acquires_merge: WBGene00205313
      Acquires_merge: WBGene00111047
        WBGene00205313
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fln
    RNASeq_FPKM: WBls:0000032 9.69302 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 3.64205 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        4.44502 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
    Ortholog (18)
    Paralog: WBGene00089718 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00096016 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00097822 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00100220 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00104091 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00112003 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00113697 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00114764 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Immunoglobulin E-set; Filamin/ABP280 repeat; Filamin/ABP280 repeat-like; Immunoglobulin-like fold; CH domain superfamily; Calponin homology domain; and Calponin homology (CH) domain. Is an ortholog of C. elegans fln-1. In C. elegans, fln-1 is involved in several processes, including axon development; semaphorin-plexin signaling pathway; and uterus morphogenesis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA21492
    Corresponding_transcript: PPA21492.1
    Other_sequence (83)
  Experimental_info: Microarray_results: GPL14372_Probes_20699
      GPL14372_Probes_20700
      GPL14372_Probes_20701
      GPL14372_Probes_20702
      GPL14372_Probes_20703
      GPL14372_Probes_20704
      GPL14372_Probes_20708
      GPL14372_Probes_20710
      GPL14372_Probes_20711
      GPL14372_Probes_20712
    Expression_cluster: WBPaper00041207:PP_dauer_down
  Method: Gene