WormBase Tree Display for Gene: WBGene00113697

WBGene00113697 SMap: S_parent: Sequence: PPA_ChrI
  Identity: Version: 8
    Name: CGC_name: Ppa-atn-1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA24143
      Molecular_name: PPA24143
        PPA24143.1
        PP46321
      Other_name: GENEPREDICTION_SNAP300000080894
        UMS-S469-1.5 Person_evidence: WBPerson606
      Public_name: Ppa-atn-1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:06 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Ppa-atn-1
        3 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        4 08 May 2019 10:09:24 WBPerson1983 Name_change: CGC_name: Ppa-atn-1
        5 04 Feb 2020 15:43:57 WBPerson1983 Name_change: CGC_name: Removed
        6 04 Jun 2020 14:38:21 WBPerson1983 Name_change: CGC_name: Ppa-atn-1
        7 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        8 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Ppa-atn-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: atn
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
            RNASeq.pristionchus.total_over_all_stages.control_mean
    Ortholog (23)
    Paralog: WBGene00089718 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00096016 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00097822 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00100220 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00104091 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00111046 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00112003 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00114764 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: CH domain superfamily; Calponin homology domain; and Calponin homology (CH) domain. Is an ortholog of C. elegans atn-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA24143
    Corresponding_transcript: PPA24143.1
    Other_sequence (17)
  Experimental_info: Microarray_results: GPL14372_Probes_17092
      GPL14372_Probes_17093
      GPL14372_Probes_17094
      GPL14372_Probes_17095
      GPL14372_Probes_17096
    Expression_cluster: WBPaper00041472:Phosphorylated_protein
      WBPaper00050265:C.albidus_vs_OP50_upregulated
  Remark: [190208 pad] The CGC name Ppa-atn-1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [200204 pad] The CGC name Ppa-atn-1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Ppa-atn-1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene