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WormBase Tree Display for Gene: WBGene00111174

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Name Class

WBGene00111174SMapS_parentSequencePPA_ChrIII
IdentityVersion1
NameSequence_namePPA21620
Molecular_namePPA21620
PPA21620.1
PP55154
Other_nameGENEPREDICTION_SNAP300000078139
UMM-S442-2.118Person_evidenceWBPerson606
Public_namePPA21620
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000325.9621From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010110.5627From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
5.50827From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
5.9621From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
Ortholog (29)
ParalogWBGene00096311Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Putative zinc-RING and/or ribbon; Protein kinase C-like, phorbol ester/diacylglycerol-binding domain; Phorbol esters/diacylglycerol binding domain (C1 domain); and Multiheme cytochrome superfamily. Is an ortholog of C. elegans F20H11.1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA21620
Corresponding_transcriptPPA21620.1
Other_sequenceOden_isotig19144
EX552381.1
PP01448
BXC02857_1
Acan_isotig02195
JI172842.1
PPC08794_1
PPC02381_1
ACC21668_1
Hbac_isotig06368
Experimental_infoMicroarray_resultsGPL14372_Probes_63514
GPL14372_Probes_63515
GPL14372_Probes_63516
GPL14372_Probes_63517
GPL14372_Probes_63518
Expression_clusterWBPaper00041472:Phosphorylated_protein
WBPaper00050265:C.albidus_vs_OP50_upregulated
WBPaper00050265:C.curvatus_vs_OP50_upregulated
WBPaper00041207:PP_dauer_up
WBPaper00041466:PP_germline-ablation_regulated
MethodGene