Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00111182

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00111182SMapS_parentSequencePPA_ChrIII
IdentityVersion3
NameCGC_namePpa-ucr-1Inferred_automaticallyfrom gene merge
Sequence_namePPA21628
Molecular_namePPA21628
PPA21628.1
PP65173
Other_nameGENEPREDICTION_SNAP300000078147
GENEPREDICTION_SNAP300000078148
UMA-S407-2.25Person_evidenceWBPerson606
Public_namePpa-ucr-1
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
217 Nov 2017 15:19:42WBPerson4055Name_changeCGC_namePpa-ucr-1
324 Nov 2017 09:46:50WBPerson4055EventAcquires_mergeWBGene00111183
Acquires_mergeWBGene00111183
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classucr
RNASeq_FPKMWBls:000003227.9287From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010127.9287From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
30.2006From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
62.6732From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00183051
Ortholog (36)
ParalogWBGene00089948Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00098223Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable metal ion binding activity. Is an ortholog of C. elegans ucr-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA21628
Corresponding_transcriptPPA21628.1
Other_sequence (81)
Experimental_infoMicroarray_resultsGPL14372_Probes_42716
GPL14372_Probes_42717
GPL14372_Probes_42718
GPL14372_Probes_42719
GPL14372_Probes_42720
Expression_clusterWBPaper00041466:PP_germline-ablation_regulated
WBPaper00041606:PP_S.marcescens_regulated
WBPaper00041606:PP_X.nematophila_regulated
MethodGene