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WormBase Tree Display for Gene: WBGene00112008

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Name Class

WBGene00112008SMapS_parentSequencePPA_ChrI
IdentityVersion2
NameCGC_namePpa-rnr-2From_analysisInferred_from_orthology
Sequence_namePPA22454
Molecular_namePPA22454
PPA22454.1
PP67399
Other_nameGENEPREDICTION_SNAP300000079199
UMM-S196-11.1Person_evidenceWBPerson606
Public_namePpa-rnr-2
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_namePpa-rnr-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrnr
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010112.8962From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
4.29873From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00183432
00183433
Ortholog (43)
ParalogWBGene00275324Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable oxidoreductase activity. Predicted to be involved in deoxyribonucleotide biosynthetic process. Is an ortholog of C. elegans rnr-2. In C. elegans, rnr-2 is involved in embryo development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA22454
Corresponding_transcriptPPA22454.1
Other_sequence (57)
Experimental_infoMicroarray_resultsGPL14372_Probes_51195
Expression_clusterWBPaper00041207:PP_dauer_up
WBPaper00041466:PP_germline-ablation_regulated
WBPaper00041606:PP_X.nematophila_regulated
MethodGene