WormBase Tree Display for Gene: WBGene00112176

WBGene00112176 SMap: S_parent: Sequence: PPA_ChrII
  Identity: Version: 1
    Name: CGC_name: Ppa-brf-1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA22622
      Molecular_name: PPA22622
        PPA22622.1
        PP16964
      Other_name: GENEPREDICTION_SNAP300000079363
        UMM-S10-89.35 Person_evidence: WBPerson606
      Public_name: Ppa-brf-1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:06 WBPerson4055 Event: Imported: from NGASP
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: brf
    RNASeq_FPKM: WBls:0000032 24.2899 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 5.06217 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        9.78402 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
    GO_annotation: 00183514
      00183515
      00183516
    Ortholog (28)
    Paralog: WBGene00104331 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00117680 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable TBP-class protein binding activity. Predicted to be involved in transcription preinitiation complex assembly. Is an ortholog of C. elegans brf-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA22622
    Corresponding_transcript: PPA22622.1
    Other_sequence (22)
  Experimental_info: Microarray_results: GPL14372_Probes_15789
      GPL14372_Probes_15790
      GPL14372_Probes_15791
      GPL14372_Probes_15792
      GPL14372_Probes_15793
    Expression_cluster: WBPaper00041466:PP_germline-ablation_regulated
  Method: Gene