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WormBase Tree Display for Gene: WBGene00112256

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Name Class

WBGene00112256SMapS_parentSequencePPA_ChrII
IdentityVersion5
NameCGC_namePpa-cam-1From_analysisInferred_from_orthology
Sequence_namePPA22702
Molecular_namePPA22702
PPA22702.1
PP57068
Other_nameGENEPREDICTION_SNAP300000079443
UMM-S10-93.108Person_evidenceWBPerson606
Public_namePpa-cam-1
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:52WBPerson4055EventAcquires_mergeWBGene00202863
308 May 2019 10:09:26WBPerson1983Name_changeCGC_namePpa-cam-1
428 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
528 Jul 2021 11:12:29WBPerson1983Name_changeCGC_namePpa-cam-1
Acquires_mergeWBGene00202863
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcam
RNASeq_FPKMWBls:00000322.54014From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010118.9982From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
2.54014From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
7.17945From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00183590
00183591
00183592
00183593
00183594
Ortholog (34)
Paralog (31)
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity; protein kinase activity; and zinc ion binding activity. Predicted to be a structural constituent of cuticle. Is an ortholog of C. elegans cam-1. In C. elegans, cam-1 is involved in generation of neurons and neuroblast migration.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA22702
Corresponding_transcriptPPA22702.1
Other_sequence (23)
Experimental_infoMicroarray_resultsGPL14372_Probes_15866
GPL14372_Probes_15867
GPL14372_Probes_64165
GPL14372_Probes_64169
GPL14372_Probes_64170
GPL14372_Probes_64171
GPL14372_Probes_64172
Expression_clusterWBPaper00041207:PP_dauer_up
WBPaper00041466:PP_germline-ablation_regulated
WBPaper00041606:PP_X.nematophila_regulated
Remark[210528 pad] The CGC name Ppa-cam-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene