WormBase Tree Display for Gene: WBGene00114796
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| WBGene00114796 | SMap | S_parent | Sequence | PPA_ChrII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 8 | |||||||
| Name | CGC_name | Ppa-chdh-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA25242 | ||||||||
| Molecular_name | PPA25242 | ||||||||
| PPA25242.1 | |||||||||
| PP54772 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000082090 | ||||||||
| UMM-S387-2.8 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-chdh-1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:06 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 18 Nov 2010 11:54:47 | WBPerson2970 | Name_change | CGC_name | Ppa-eif-3.D | ||||
| 3 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 01 Oct 2019 10:47:49 | WBPerson1983 | Name_change | CGC_name | Ppa-eif-3.D | ||||
| 5 | 27 Nov 2019 12:48:15 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 04 Jun 2020 14:38:21 | WBPerson1983 | Name_change | CGC_name | Ppa-eif-3.D | ||||
| 7 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 8 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Ppa-chdh-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | chdh | ||||||||
| RNASeq_FPKM | WBls:0000032 | 18.9101 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 10.7145 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 13.2333 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00184686 | ||||||||
| 00184687 | |||||||||
| 00184688 | |||||||||
| 00184689 | |||||||||
| 00184690 | |||||||||
| 00184691 | |||||||||
| 00184692 | |||||||||
| Ortholog (33) | |||||||||
| Structured_description | Automated_description | Predicted to enable flavin adenine dinucleotide binding activity; oxidoreductase activity, acting on CH-OH group of donors; and translation initiation factor activity. Predicted to be involved in mitochondrial electron transport, ubiquinol to cytochrome c. Predicted to be located in cytoplasm. Predicted to be part of eukaryotic translation initiation factor 3 complex and mitochondrial respiratory chain complex III. Is an ortholog of C. elegans chdh-1. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA25242 | |||||||
| Corresponding_transcript | PPA25242.1 | ||||||||
| Other_sequence (277) | |||||||||
| Experimental_info | Microarray_results (20) | ||||||||
| Expression_cluster | WBPaper00041466:PP_germline-ablation_regulated | ||||||||
| WBPaper00041606:PP_X.nematophila_regulated | |||||||||
| Remark | [190208 pad] The CGC name Ppa-eif-3.D was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [191127 pad] The CGC name Ppa-eif-3.D was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| [210528 pad] The CGC name Ppa-eif-3.D was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
