WormBase Tree Display for Gene: WBGene00114841
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| WBGene00114841 | SMap | S_parent | Sequence | PPA_ChrII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 5 | |||||||
| Name | Sequence_name | PPA25287 | |||||||
| Molecular_name | PPA25287 | ||||||||
| PPA25287.1 | |||||||||
| PP56580 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000082135 | ||||||||
| UMM-S387-4.1 | Person_evidence | WBPerson606 | |||||||
| Public_name | PPA25287 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:06 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 20 Mar 2018 10:26:12 | WBPerson4025 | Name_change | CGC_name | Ppa-mix-1 | ||||
| 3 | 08 Feb 2019 15:42:28 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 08 May 2019 10:09:26 | WBPerson1983 | Name_change | CGC_name | Ppa-mix-1 | ||||
| 5 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| RNASeq_FPKM | WBls:0000032 | 9.60822 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 10.389 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 21.5587 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 9.60822 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| GO_annotation | 00184736 | ||||||||
| 00184737 | |||||||||
| 00184738 | |||||||||
| 00184739 | |||||||||
| Ortholog (49) | |||||||||
| Paralog | WBGene00089965 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| WBGene00098666 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00107491 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00109381 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00112336 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00203907 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable ATP binding activity and ATP hydrolysis activity. Predicted to be involved in chromosome organization. Predicted to be located in chromosome. Is an ortholog of C. elegans mix-1. In C. elegans, mix-1 is involved in several processes, including dosage compensation by hypoactivation of X chromosome; mitotic chromosome condensation; and positive regulation of nematode male tail tip morphogenesis. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA25287 | |||||||
| Corresponding_transcript | PPA25287.1 | ||||||||
| Other_sequence (54) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_83896 | |||||||
| GPL14372_Probes_83897 | |||||||||
| GPL14372_Probes_83899 | |||||||||
| GPL14372_Probes_83900 | |||||||||
| GPL14372_Probes_83901 | |||||||||
| GPL14372_Probes_83902 | |||||||||
| GPL14372_Probes_83903 | |||||||||
| GPL14372_Probes_83904 | |||||||||
| GPL14372_Probes_83905 | |||||||||
| GPL14372_Probes_83906 | |||||||||
| Expression_cluster | WBPaper00041466:PP_germline-ablation_regulated | ||||||||
| Remark | [190208 pad] The CGC name Ppa-mix-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Ppa-mix-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
