WormBase Tree Display for Gene: WBGene00115240
expand all nodes | collapse all nodes | view schema
| WBGene00115240 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 7 | |||||||
| Name | Sequence_name | PPA25686 | |||||||
| Molecular_name | PPA25686 | ||||||||
| PPA25686.1 | |||||||||
| PP64496 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000082411 | ||||||||
| GENEPREDICTION_SNAP300000085622 | |||||||||
| GENEPREDICTION_SNAP300000085624 | |||||||||
| GENEPREDICTION_SNAP300000085626 | |||||||||
| GENEPREDICTION_SNAP300000085627 | |||||||||
| UMM-S259-16.83 | Person_evidence | WBPerson606 | |||||||
| Public_name | PPA25686 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:06 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 17 Nov 2017 15:19:43 | WBPerson4055 | Name_change | CGC_name | Ppa-nhr-47 | ||||
| 3 | 24 Nov 2017 09:46:52 | WBPerson4055 | Event | Acquires_merge | WBGene00118384 | ||||
| 4 | 24 Nov 2017 09:46:52 | WBPerson4055 | Event | Acquires_merge | WBGene00118386 | ||||
| 5 | 24 Nov 2017 09:46:52 | WBPerson4055 | Event | Acquires_merge | WBGene00118388 | ||||
| 6 | 24 Nov 2017 09:46:52 | WBPerson4055 | Event | Acquires_merge | WBGene00118389 | ||||
| 7 | 20 Mar 2018 10:26:13 | WBPerson4025 | Name_change | CGC_name | Removed | ||||
| Acquires_merge | WBGene00118388 | ||||||||
| WBGene00118389 | |||||||||
| WBGene00118384 | |||||||||
| WBGene00118386 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| RNASeq_FPKM | WBls:0000032 | 5.1765 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 12.2256 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | ||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 5.1765 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| 5.8007 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| GO_annotation | 00184937 | ||||||||
| 00184938 | |||||||||
| 00184939 | |||||||||
| 00184940 | |||||||||
| Ortholog (45) | |||||||||
| Paralog | WBGene00099802 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans F20D1.3 and F25G6.9. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA25686 | |||||||
| Corresponding_transcript | PPA25686.1 | ||||||||
| Other_sequence (55) | |||||||||
| Experimental_info | Microarray_results (24) | ||||||||
| Expression_cluster | WBPaper00041472:Phosphorylated_protein | ||||||||
| WBPaper00041207:PP_dauer_up | |||||||||
| WBPaper00041466:PP_germline-ablation_regulated | |||||||||
| Remark | [180319 gw3] The CGC name Ppa-nhr-47 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson4025 | ||||||
| Method | Gene |
