WormBase Tree Display for Gene: WBGene00116171

WBGene00116171 SMap: S_parent: Sequence: PPA_ChrI
  Identity: Version: 7
    Name: CGC_name: Ppa-slcr-46.2 From_analysis: Inferred_from_orthology
      Sequence_name: PPA26617
      Molecular_name: PPA26617
        PPA26617.1
        PP73460
      Other_name: GENEPREDICTION_SNAP300000085041
        GENEPREDICTION_SNAP300000085042
        GENEPREDICTION_SNAP300000085044
        UMM-S7-38.36 Person_evidence: WBPerson606
      Public_name: Ppa-slcr-46.2
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:06 WBPerson4055 Event: Imported: from NGASP
        2 24 Nov 2017 09:46:51 WBPerson4055 Event: Acquires_merge: WBGene00116172
        3 24 Nov 2017 09:46:51 WBPerson4055 Event: Acquires_merge: WBGene00116174
        4 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Removed
        5 01 Oct 2019 10:47:49 WBPerson1983 Name_change: CGC_name: Ppa-slcr-46.2
        6 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        7 28 Jul 2021 11:12:27 WBPerson1983 Name_change: CGC_name: Ppa-slcr-46.2
      Acquires_merge: WBGene00116174
        WBGene00116172
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: slcr
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
            RNASeq.pristionchus.total_over_all_stages.control_mean
    GO_annotation: 00185323
      00185324
    Ortholog (30)
    Paralog: WBGene00089749 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00099347 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00102163 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00106714 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Is an ortholog of C. elegans slcr-46.2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA26617
    Corresponding_transcript: PPA26617.1
    Other_sequence: JI166968.1
      Oden_isotig05833
      Oden_isotig05832
  Experimental_info: Microarray_results: GPL14372_Probes_779
      GPL14372_Probes_780
      GPL14372_Probes_781
      GPL14372_Probes_782
      GPL14372_Probes_783
      GPL14372_Probes_786
      GPL14372_Probes_787
      GPL14372_Probes_788
      GPL14372_Probes_789
      GPL14372_Probes_790
    Expression_cluster: WBPaper00041207:PP_dauer_up
  Remark: [180319 gw3] The CGC name Ppa-reps-1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson4025
    [210528 pad] The CGC name Ppa-slcr-46.2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene