WormBase Tree Display for Gene: WBGene00116394
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WBGene00116394 | SMap | S_parent | Sequence | PPA_ChrV | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 9 | |||||||
Name | CGC_name | Ppa-tbcd-1 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | PPA26840 | ||||||||
Molecular_name | PPA26840 | ||||||||
PPA26840.1 | |||||||||
PP62261 | |||||||||
Other_name | GENEPREDICTION_SNAP300000083665 | ||||||||
GENEPREDICTION_SNAP300000083666 | |||||||||
GENEPREDICTION_SNAP300000083667 | |||||||||
UMM-S2873-6.81 | Person_evidence | WBPerson606 | |||||||
Public_name | Ppa-tbcd-1 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:06 | WBPerson4055 | Event | Imported | from NGASP | ||
2 | 24 Nov 2017 09:46:51 | WBPerson4055 | Event | Acquires_merge | WBGene00116395 | ||||
3 | 24 Nov 2017 09:46:51 | WBPerson4055 | Event | Acquires_merge | WBGene00116396 | ||||
4 | 24 Nov 2017 09:46:52 | WBPerson4055 | Event | Acquires_merge | WBGene00205916 | ||||
5 | 20 Mar 2018 10:26:12 | WBPerson4025 | Name_change | CGC_name | Ppa-tbcd-1 | ||||
6 | 08 Feb 2019 15:42:28 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
7 | 08 May 2019 10:09:26 | WBPerson1983 | Name_change | CGC_name | Ppa-tbcd-1 | ||||
8 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
9 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Ppa-tbcd-1 | ||||
Acquires_merge | WBGene00116395 | ||||||||
WBGene00116396 | |||||||||
WBGene00205916 | |||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | tbcd | ||||||||
RNASeq_FPKM | WBls:0000032 | 1.24007 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
WBls:0000101 | 1.24007 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
2.52858 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
6.34568 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
GO_annotation | 00185397 | ||||||||
00185398 | |||||||||
00185399 | |||||||||
00185400 | |||||||||
Ortholog (29) | |||||||||
Structured_description | Automated_description | Predicted to enable GTPase activator activity and beta-tubulin binding activity. Predicted to be involved in post-chaperonin tubulin folding pathway and tubulin complex assembly. Is an ortholog of C. elegans tbcd-1. In C. elegans, tbcd-1 is involved in microtubule cytoskeleton organization. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA26840 | |||||||
Corresponding_transcript | PPA26840.1 | ||||||||
Other_sequence | FG581856.1 | ||||||||
JI165301.1 | |||||||||
PPC19647_1 | |||||||||
PPC03092_1 | |||||||||
PPC04506_1 | |||||||||
FG350993.1 | |||||||||
FG347594.1 | |||||||||
Experimental_info | Microarray_results | GPL14372_Probes_11548 | |||||||
GPL14372_Probes_11549 | |||||||||
GPL14372_Probes_11550 | |||||||||
GPL14372_Probes_11551 | |||||||||
GPL14372_Probes_57410 | |||||||||
GPL14372_Probes_57413 | |||||||||
GPL14372_Probes_57414 | |||||||||
GPL14372_Probes_57415 | |||||||||
GPL14372_Probes_57416 | |||||||||
Expression_cluster | WBPaper00041207:PP_dauer_up | ||||||||
WBPaper00041466:PP_germline-ablation_regulated | |||||||||
Remark | [190208 pad] The CGC name Ppa-tbcd-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
[210528 pad] The CGC name Ppa-tbcd-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
Method | Gene |