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WormBase Tree Display for Gene: WBGene00117742

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Name Class

WBGene00117742SMapS_parentSequencePPA_ChrII
IdentityVersion2
NameSequence_namePPA28188
Molecular_namePPA28188
PPA28188.1
PP64435
Other_nameGENEPREDICTION_SNAP300000086605
GENEPREDICTION_SNAP300000086607
UMA-S10-75.68Person_evidenceWBPerson606
Public_namePPA28188
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:07WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:51WBPerson4055EventAcquires_mergeWBGene00117744
Acquires_mergeWBGene00117744
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000329.56204From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010114.4794From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
33.8762From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
9.56204From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
Ortholog (41)
Paralog (11)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: SEFIR domain; Zinc finger, C2H2 type; Zinc finger C2H2 superfamily; C2H2-type zinc finger; and Zinc finger C2H2-type. Is an ortholog of C. elegans F56D1.1; lsy-2; and zfp-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA28188
Corresponding_transcriptPPA28188.1
Experimental_infoMicroarray_resultsGPL14372_Probes_58888
GPL14372_Probes_58889
GPL14372_Probes_58890
GPL14372_Probes_58891
GPL14372_Probes_58894
Expression_clusterWBPaper00041466:PP_germline-ablation_regulated
MethodGene