WormBase Tree Display for Gene: WBGene00118063
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| WBGene00118063 | SMap | S_parent | Sequence | PPA_ChrIII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 7 | |||||||
| Name | CGC_name | Ppa-abcf-3.2 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA28509 | ||||||||
| Molecular_name | PPA28509 | ||||||||
| PPA28509.1 | |||||||||
| PP75969 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000085301 | ||||||||
| GENEPREDICTION_SNAP300000085302 | |||||||||
| UMM-S112-1.24 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-abcf-3.2 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:07 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 24 Nov 2017 09:46:51 | WBPerson4055 | Event | Acquires_merge | WBGene00118064 | ||||
| 3 | 20 Mar 2018 10:26:12 | WBPerson4025 | Name_change | CGC_name | Ppa-abcf-3.2 | ||||
| 4 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 5 | 08 May 2019 10:09:27 | WBPerson1983 | Name_change | CGC_name | Ppa-abcf-3.2 | ||||
| 6 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 7 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Ppa-abcf-3.2 | ||||
| Acquires_merge | WBGene00118064 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | abcf | ||||||||
| RNASeq_FPKM | WBls:0000032 | 15.0343 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 12.8233 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 9.28587 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| GO_annotation | 00186092 | ||||||||
| 00186093 | |||||||||
| Ortholog (31) | |||||||||
| Paralog | WBGene00089890 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| WBGene00276323 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00278445 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable ATP binding activity and ATP hydrolysis activity. Is an ortholog of C. elegans abcf-3. In C. elegans, abcf-3 is involved in positive regulation of peptidyl-serine phosphorylation; regulation of apoptotic process; and regulation of translation. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA28509 | |||||||
| Corresponding_CDS_history | PPA28509:pp275 | ||||||||
| Corresponding_transcript | PPA28509.1 | ||||||||
| Other_sequence (57) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_65897 | |||||||
| GPL14372_Probes_65898 | |||||||||
| GPL14372_Probes_65899 | |||||||||
| GPL14372_Probes_65900 | |||||||||
| GPL14372_Probes_65901 | |||||||||
| GPL14372_Probes_65902 | |||||||||
| GPL14372_Probes_65903 | |||||||||
| GPL14372_Probes_65904 | |||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_down | ||||||||
| WBPaper00041466:PP_germline-ablation_regulated | |||||||||
| WBPaper00041606:PP_X.nematophila_regulated | |||||||||
| Remark | [190208 pad] The CGC name Ppa-abcf-3.2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Ppa-abcf-3.2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
