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WormBase Tree Display for Gene: WBGene00118488

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Name Class

WBGene00118488SMapS_parentSequencePPA_ChrI
IdentityVersion1
NameCGC_namePpa-snt-5From_analysisInferred_from_orthology
Sequence_namePPA28934
Molecular_namePPA28934
PPA28934.1
PP72298
Other_nameGENEPREDICTION_SNAP300000085727
UMM-S259-2.12Person_evidenceWBPerson606
Public_namePpa-snt-5
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:07WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsnt
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00186348
Ortholog (31)
ParalogWBGene00090226Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00090434Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00097533Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00097802Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00114832Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00118741Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00274022Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00277561Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00306036Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be located in membrane. Is an ortholog of C. elegans snt-5.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA28934
Corresponding_transcriptPPA28934.1
Other_sequence (30)
Experimental_infoMicroarray_resultsGPL14372_Probes_21256
GPL14372_Probes_21257
GPL14372_Probes_21258
GPL14372_Probes_21259
GPL14372_Probes_21260
Expression_clusterWBPaper00041207:PP_dauer_up
MethodGene