WormBase Tree Display for Gene: WBGene00118651
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WBGene00118651 | SMap | S_parent | Sequence | PPA_ChrI | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 6 | |||||||
Name | CGC_name | Ppa-vars-1 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | PPA29097 | ||||||||
Molecular_name | PPA29097 | ||||||||
PPA29097.1 | |||||||||
PP74033 | |||||||||
Other_name | GENEPREDICTION_SNAP300000085884 | ||||||||
UMM-S2844-17.29 | Person_evidence | WBPerson606 | |||||||
Public_name | Ppa-vars-1 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:07 | WBPerson4055 | Event | Imported | from NGASP | ||
2 | 20 Mar 2018 10:26:11 | WBPerson4025 | Name_change | CGC_name | Ppa-vars-1 | ||||
3 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
4 | 08 May 2019 10:09:24 | WBPerson1983 | Name_change | CGC_name | Ppa-vars-1 | ||||
5 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
6 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Ppa-vars-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | vars | ||||||||
RNASeq_FPKM (2) | |||||||||
GO_annotation | 00186412 | ||||||||
00186413 | |||||||||
00186414 | |||||||||
00186415 | |||||||||
00186416 | |||||||||
00186417 | |||||||||
00186418 | |||||||||
00186419 | |||||||||
Ortholog (30) | |||||||||
Paralog | WBGene00091800 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
WBGene00114535 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00118197 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00272260 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00276994 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00282579 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00304902 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00306061 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable ATP binding activity; catalytic activity, acting on a tRNA; and glycosyltransferase activity. Predicted to be involved in valyl-tRNA aminoacylation. Is an ortholog of C. elegans vars-1. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA29097 | |||||||
Corresponding_transcript | PPA29097.1 | ||||||||
Other_sequence (11) | |||||||||
Experimental_info | Microarray_results | GPL14372_Probes_31199 | |||||||
GPL14372_Probes_31200 | |||||||||
GPL14372_Probes_31201 | |||||||||
GPL14372_Probes_31202 | |||||||||
GPL14372_Probes_31203 | |||||||||
GPL14372_Probes_88228 | |||||||||
Expression_cluster | WBPaper00041466:PP_germline-ablation_regulated | ||||||||
Remark | [190208 pad] The CGC name Ppa-vars-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
[210528 pad] The CGC name Ppa-vars-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
Method | Gene |