WormBase Tree Display for Gene: WBGene00118753
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| WBGene00118753 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | Sequence_name | PPA29199 | |||||||
| Molecular_name | PPA29199 | ||||||||
| PPA29199.1 | |||||||||
| PP59483 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000085988 | ||||||||
| GENEPREDICTION_SNAP300000085989 | |||||||||
| UMM-S278-7.9 | Person_evidence | WBPerson606 | |||||||
| Public_name | PPA29199 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:07 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 17 Nov 2017 15:19:43 | WBPerson4055 | Name_change | CGC_name | Ppa-rpb-12 | ||||
| 3 | 24 Nov 2017 09:46:52 | WBPerson4055 | Event | Acquires_merge | WBGene00118754 | ||||
| 4 | 20 Mar 2018 10:26:13 | WBPerson4025 | Name_change | CGC_name | Removed | ||||
| 5 | 28 May 2021 19:05:19 | WBPerson1983 | Name_change | CGC_name | Ppa-txt-6 | ||||
| 6 | 28 Jul 2021 11:12:30 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| Acquires_merge | WBGene00118754 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| RNASeq_FPKM | WBls:0000032 | 31.7788 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 12.2608 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 5.00374 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00186455 | ||||||||
| 00186456 | |||||||||
| 00186457 | |||||||||
| 00186458 | |||||||||
| 00186459 | |||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00098701 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Predicted to enable DNA binding activity and DNA-directed 5'-3' RNA polymerase activity. Predicted to be involved in DNA-templated transcription and ribosome biogenesis. Predicted to be located in nucleus. Is an ortholog of C. elegans Y61A9LA.10 and txt-6. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA29199 | |||||||
| Corresponding_transcript | PPA29199.1 | ||||||||
| Other_sequence (389) | |||||||||
| Experimental_info | Microarray_results (21) | ||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_down | ||||||||
| WBPaper00041207:PP_dauer_up | |||||||||
| WBPaper00041466:PP_germline-ablation_regulated | |||||||||
| Remark | [180319 gw3] The CGC name Ppa-rpb-12 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson4025 | ||||||
| [210728 pad] The CGC name Ppa-txt-6 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
