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WormBase Tree Display for Gene: WBGene00129549

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Name Class

WBGene00129549SMapS_parentSequenceCjap.Contig17052
IdentityVersion2
NameCGC_nameCjp-rgs-4From_analysisInferred_from_orthology
Sequence_nameCJA10345
Molecular_nameCJA10345
CJA10345.1
JA39562
Public_nameCjp-rgs-4
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:22WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCjp-rgs-4
229 Jul 2011 11:13:37WBPerson4055EventImportedAugustus import
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrgs
RNASeq_FPKMWBls:000000410.1963From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002728.6394From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003819.1922From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
21.6651From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
24.1381From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000413.06665From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
6.19349From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
6.45305From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
7.08966From_analysisRNASeq.japonica.WBls:0000041.control_mean
7.28921From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
7.34251From_analysisRNASeq.japonica.WBls:0000041.control_median
7.39582From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
7.7923From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
8.61527From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
9.91153From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
WBls:000010110.6833From_analysisRNASeq.japonica.total_over_all_stages.control_mean
7.7923From_analysisRNASeq.japonica.total_over_all_stages.control_median
OrthologWBGene00004347Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00004350Caenorhabditis elegansFrom_analysisTreeFam
WBGene00004351Caenorhabditis elegansFrom_analysisTreeFam
WBGene00004352Caenorhabditis elegansFrom_analysisTreeFam
WBGene00004353Caenorhabditis elegansFrom_analysisTreeFam
WBGene00004354Caenorhabditis elegansFrom_analysisTreeFam
WBGene00021988Caenorhabditis elegansFrom_analysisTreeFam
WBGene00031745Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00051966Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00059606Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00113522Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00148896Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00147994Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00151582Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g6323Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g15518Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14925Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g15922Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g13112Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g16953Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g16038Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g14310Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g3921Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g3909Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00811.g14302Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-rgs-4Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g14953Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00647.g13980Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_16919Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_007140Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12568Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_20032100Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g6236Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00119705Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00137477Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00132514Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00119776Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00120951Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00127341Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00216761Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: RGS, subdomain 1/3; RGS domain; RGS domain superfamily; and Regulator of G protein signaling domain. Is an ortholog of C. elegans rgs-4.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA10345
Corresponding_transcriptCJA10345.1
Other_sequenceBG467730.1
FC551322.1
EY470679.1
EY462654.1
FC549819.1
Acan_isotig04280
CJC13447_1
AE00624
Dviv_isotig09352
JI211268.1
Hbac_isotig06584
NAC00476_1
EY466023.1
JI462059.1
Dviv_isotig09350
EY462254.1
CR01462
EY463661.1
EY465347.1
Dviv_isotig09348
EY466853.1
EY462083.1
EY462603.1
EY473326.1
CRC05742_1
EY459963.1
Dviv_isotig09349
EY465167.1
FC550458.1
ACC31755_1
ACC07776_2
EY463501.1
AYC02316_1
EX541420.1
Oden_isotig19435
EY458615.1
JI220824.1
Experimental_infoExpr_patternExpr1088660
Microarray_resultsGPL14145_CJA10345_243-302_0.711_40_B
GPL14145_CJA10345_475-534_0.953_1_A
MethodGene