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WormBase Tree Display for Gene: WBGene00135731

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Name Class

WBGene00135731SMapS_parentSequenceCjap.Contig17556
IdentityVersion2
NameCGC_nameCjp-cbn-1From_analysisInferred_from_orthology
Sequence_nameCJA16527
Molecular_nameCJA16527
CJA16527.1
JA10591
Public_nameCjp-cbn-1
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:23WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCjp-cbn-1
229 Jul 2011 11:13:38WBPerson4055EventImportedAugustus import
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcbn
RNASeq_FPKMWBls:000000428.6315From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002719.0074From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003817.148From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
17.6132From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
18.0784From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000410.866535From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
1.23483From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
1.83152From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
1.84279From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
2.04828From_analysisRNASeq.japonica.WBls:0000041.control_median
2.25377From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
2.66336From_analysisRNASeq.japonica.WBls:0000041.control_mean
3.73891From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
4.6134From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
4.92513From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
WBls:00001013.73891From_analysisRNASeq.japonica.total_over_all_stages.control_median
8.01324From_analysisRNASeq.japonica.total_over_all_stages.control_mean
GO_annotation00199814
OrthologWBGene00019285Caenorhabditis elegansFrom_analysisInparanoid_8
WormBase-Compara
WBGene00029224Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00064708Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00099836Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00146311Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00159238Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00224976Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g7173Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g6764Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g21313Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g18320Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17505Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g25609Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g876Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g8425Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g24377Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g22511Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_11529.g23298Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_16517.g25387Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-cbn-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold605.g5604Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold605.g5605Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00467.g11757Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_14342Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_008141Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08198Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g11363Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20002300Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g3092Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00245704Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00259282Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00121115Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00120025Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00120039Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00120998Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00123425Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00124182Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00126286Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00127147Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00127657Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00130298Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00131364Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00138582Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00177541Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00178478Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00208912Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00211296Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00213199Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00213406Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity. Is an ortholog of C. elegans cbn-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA16527
Corresponding_transcriptCJA16527.1
Other_sequenceCSC00653_1
JI460765.1
MAC02043_1
Dviv_isotig08909
PPC19610_1
JI174098.1
JI464053.1
MJ03698
FD517126.1
MHC10603_1
Dviv_isotig08912
AF153720.1
PPC13861_1
Oden_isotig14681
MJ04709
MJC02791_1
Dviv_isotig08910
MH03194
AS12084
JI167839.1
AE00451
JI167304.1
JI466282.1
Acan_isotig00109
JI166637.1
Acan_isotig00110
Experimental_infoExpr_patternExpr1091727
Microarray_resultsGPL14145_CJA16527_1051-1110_0.886_19_A
GPL14145_CJA16527_1280-1339_0.861_36_C
GPL14145_CJA16527_1294-1353_0.880_23_B
MethodGene