Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00140848

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00140848SMapS_parentSequenceCbre_Contig54
IdentityVersion1
NameCGC_nameCbn-unc-36From_analysisInferred_from_orthology
Sequence_nameCBN02123
Molecular_nameCBN02123
CBN02123.1
CN20224
Other_nameCBN02123
Public_nameCbn-unc-36
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-unc-36
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000020From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
2.82896From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
3.02167From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
3.39846From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
3.47229From_analysisRNASeq.brenneri.WBls:0000002.control_mean
3.68664From_analysisRNASeq.brenneri.WBls:0000002.control_median
3.97481From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
4.78507From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
5.12989From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
5.17565From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
6.40834From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
WBls:00000040.957295From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
1.91459From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
25.7312From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
26.9957From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
27.6294From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
28.1451From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
29.0877From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
WBls:00000387.93858From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
8.8497From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
9.76082From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:000004110.4154From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
1.15043From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
1.2413From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
1.39397From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
1.42842From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
1.68212From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
2.0255From_analysisRNASeq.brenneri.WBls:0000041.control_median
2.36887From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
3.31513From_analysisRNASeq.brenneri.WBls:0000041.control_mean
3.58611From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
3.64875From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
5.06357From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
5.71516From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
6.59856From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
8.74946From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
WBls:00001013.02167From_analysisRNASeq.brenneri.total_over_all_stages.control_median
3.46384From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
OrthologWBGene00006772Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00036546Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00054774Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00138010Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g4564Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g6610Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g11517Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g16527Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g14573Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g1375Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g16079Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g3799Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g19731Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g8214Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00346.g9531Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-36Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold78.g491Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00014.g938Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_19670Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_009772Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03399Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g15692Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30230600Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00096769Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00223122Brugia malayiFrom_analysisWormBase-Compara
chrIII_pilon.g8325Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00207237Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00212415Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00217615Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00241926Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00266830Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00296797Trichuris murisFrom_analysisWormBase-Compara
WBGene00301572Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00164262Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: VWA N-terminal; von Willebrand factor, type A; von Willebrand factor A-like domain superfamily; and von Willebrand factor type A domain. Is an ortholog of C. elegans unc-36. In C. elegans, unc-36 is involved in several processes, including egg-laying behavior; pharyngeal pumping; and serotonin receptor signaling pathway.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN02123
Corresponding_transcriptCBN02123.1
Other_sequenceJI165071.1
ES410424.1
JI165052.1
EX563696.1
Acan_isotig13957
FC541222.1
ACC14051_1
Oden_isotig19266
HBC17603_1
FC546635.1
FC541396.1
Oden_isotig27123
Dviv_isotig14354
AS14620
Name_isotig09415
ASC11507_1
FC547113.1
ACC07020_1
FC545838.1
MHC01303_1
Dviv_isotig34636
FC545497.1
JI165171.1
HBC15108_1
Dviv_isotig31841
MH02404
Dviv_isotig14355
Acan_isotig06525
FC542335.1
ES742282.1
Experimental_infoMicroarray_resultsGPL14142_CBN02123_460-519_0.796_112_C
GPL14142_CBN02123_3162-3221_0.919_3_B
GPL14142_CBN02123_3354-3413_0.929_1_A
MethodGene