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WormBase Tree Display for Gene: WBGene00146192

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Name Class

WBGene00146192SMapS_parentSequenceCbre_Contig72
IdentityVersion2
NameCGC_nameCbn-unc-34.1From_analysisInferred_from_orthology
Sequence_nameCBN07467
Molecular_nameCBN07467
CBN07467.1
CN15029
Public_nameCbn-unc-34.1
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:51WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbn-unc-34.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000020From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
2.08939From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
2.80298From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
2.82068From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
2.9853From_analysisRNASeq.brenneri.WBls:0000002.control_median
3.07463From_analysisRNASeq.brenneri.WBls:0000002.control_mean
3.14991From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
3.58275From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
4.67054From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
5.52119From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
6.10888From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
28.7435From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
57.4871From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
22.7185From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
33.8267From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
46.5873From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
49.4527From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
50.593From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
WBls:000003810.8511From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
11.3026From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
11.754From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:000004111.3666From_analysisRNASeq.brenneri.WBls:0000041.control_median
13.166From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
14.8442From_analysisRNASeq.brenneri.WBls:0000041.control_mean
17.447From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
18.2389From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
24.9836From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
26.0368From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
3.02988From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
31.947From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
3.53975From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
35.4585From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
36.1264From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
5.19267From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
6.20575From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
6.56796From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
9.56727From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
WBls:000010111.237From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
5.52119From_analysisRNASeq.brenneri.total_over_all_stages.control_median
OrthologWBGene00006770Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00037397Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00062141Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00128959Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g1230Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g3850Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g18556Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g21961Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g10575Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g23677Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g10848Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g21517Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g14482Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g2737Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-unc-34Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g13099Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00850.g16080Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_15264Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_019115Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00851Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g7716Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50001200Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00099054Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00230805Brugia malayiFrom_analysisWormBase-Compara
chrV_pilon.g13162Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00243953Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00263896Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00296670Trichuris murisFrom_analysisWormBase-Compara
WBGene00302007Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00164861Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: PH-like domain superfamily; WH1/EVH1 domain; and WH1 domain. Is an ortholog of C. elegans unc-34. In C. elegans, unc-34 is involved in axon development; gonad morphogenesis; and positive regulation of locomotion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN07467
Corresponding_transcriptCBN07467.1
Other_sequenceCBC07398_1
EY459379.1
Oden_isotig19132
Dviv_isotig13418
ACC12315_1
Experimental_infoMicroarray_resultsGPL14142_CBN07467_1011-1070_0.837_60_A
MethodGene