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WormBase Tree Display for Gene: WBGene00146827

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Name Class

WBGene00146827SMapS_parentSequenceCbre_Contig330
IdentityVersion1
NameSequence_nameCBN08102
Molecular_nameCBN08102
CBN08102.1
CN02565
Public_nameCBN08102
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:51WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000021.43546From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
1.64411From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
1.96302From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
1.99464From_analysisRNASeq.brenneri.WBls:0000002.control_median
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
2.02627From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
2.21553From_analysisRNASeq.brenneri.WBls:0000002.control_mean
2.66585From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
3.05256From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
4.0599From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
5.30813From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
WBls:000000415.0473From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
7.52365From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
2.96009From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
3.19347From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
4.50776From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
5.52103From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
5.59983From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
WBls:00000384.23902From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
4.28385From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
4.32868From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:000004111.5217From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
12.9852From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
1.37746From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
17.337From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
1.76678From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
2.14894From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
2.59007From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
2.9726From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
3.99861From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
4.477From_analysisRNASeq.brenneri.WBls:0000041.control_median
4.95539From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
6.06704From_analysisRNASeq.brenneri.WBls:0000041.control_mean
8.07575From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
8.76314From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
9.11918From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
9.46074From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
WBls:00001012.9726From_analysisRNASeq.brenneri.total_over_all_stages.control_median
4.60783From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00208729
00208730
00208731
00208732
00208733
00208734
00208735
OrthologWBGene00006868Caenorhabditis elegansFrom_analysisInparanoid_8
WormBase-Compara
WBGene00034210Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00052632Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00065095Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00125246Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
CBOVI.g7045Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g2291Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g730Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g348Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g12697Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g27473Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g7543Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g2978Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g4659Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g10177Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00215.g7198Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00875.g14695Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_08193.g21354Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-vab-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g4511Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g15081Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00541.g12614Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00541.g12615Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_06765Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_06766Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_004460Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g11900Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g16329Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20228920Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00114883Pristionchus pacificusFrom_analysisWormBase-Compara
chrII_pilon.g4270Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00248125Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00285349Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00155867Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00152292Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00149303Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00158706Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00151857Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00148995Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00141259Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00142452Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00142562Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00145178Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00145189Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00146442Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00146789Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00146860Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00146954Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00147480Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00147811Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00148700Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00149052Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00149110Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00150969Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00152524Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00152753Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00153659Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00154546Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00156374Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00157593Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00159985Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00160030Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00160958Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00161521Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00190633Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00191859Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00194206Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00195052Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00139948Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00140394Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00143134Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00143437Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00145478Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00190947Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00146905Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00147528Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00148811Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00152317Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00153332Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00154504Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00155995Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00159959Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
WBGene00193964Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and ephrin receptor activity. Predicted to be involved in transmembrane receptor protein tyrosine kinase signaling pathway. Predicted to be located in plasma membrane. Is an ortholog of C. elegans vab-1. In C. elegans, vab-1 is involved in several processes, including cell development; embryonic morphogenesis; and regulation of axon guidance.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN08102
Corresponding_transcriptCBN08102.1
Other_sequenceDviv_isotig32402
MIC07144_1
CJC02089_1
DAC00384_1
DA00034
MI07943
JI164913.1
Experimental_infoMicroarray_resultsGPL14142_CBN08102_2269-2328_0.865_28_C
GPL14142_CBN08102_2362-2421_0.895_9_B
GPL14142_CBN08102_2511-2570_0.704_208_A
MethodGene