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WormBase Tree Display for Gene: WBGene00150119

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Name Class

WBGene00150119SMapS_parentSequenceCbre_Contig7
IdentityVersion2
NameCGC_nameCbn-fli-1From_analysisInferred_from_orthology
Sequence_nameCBN11394
Molecular_nameCBN11394
CBN11394.1
CN30228
Public_nameCbn-fli-1
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:51WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCbn-fli-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfli
RNASeq_FPKMWBls:000000218.4214From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
3.12633From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
4.97699From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
6.16484From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
6.4989From_analysisRNASeq.brenneri.WBls:0000002.control_median
6.59789From_analysisRNASeq.brenneri.WBls:0000002.control_mean
6.83296From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
7.47672From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
9.08783From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
9.89178From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
WBls:000000414.8328From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
29.6656From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:000002410.9527From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
12.865From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
12.9216From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
14.0775From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
14.2178From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
WBls:000003811.6146From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
11.8687From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
12.1229From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:000004112.6305From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
14.4274From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
14.4708From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
17.7589From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
18.2539From_analysisRNASeq.brenneri.WBls:0000041.control_mean
18.382From_analysisRNASeq.brenneri.WBls:0000041.control_median
19.0052From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
20.4612From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
20.6274From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
26.9462From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
27.5869From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
28.6294From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
35.2084From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
37.2136From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
8.14403From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
8.95272From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
WBls:000010111.6146From_analysisRNASeq.brenneri.total_over_all_stages.control_median
13.2724From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00211441
OrthologWBGene00001443Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00023962Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00070705Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00137127Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g5602Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g6771Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g8272Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g8274Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g10349Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15375Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g25327Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1198Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g15742Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g4647Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g1448Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00419.g10588Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_11213.g23109Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-fli-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g19560Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold630.g19562Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01285.g19858Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_18412Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_21701Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_008620Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08025Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g7377Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30285600Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00107461Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00228477Brugia malayiFrom_analysisWormBase-Compara
chrIII_pilon.g8447Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00245751Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00259481Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00297289Trichuris murisFrom_analysisWormBase-Compara
WBGene00299603Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00190863Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00193665Caenorhabditis brenneriFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable actin filament binding activity. Is an ortholog of C. elegans fli-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN11394
Corresponding_CDS_historyCBN11394:np197
Corresponding_transcriptCBN11394.1
Other_sequenceJI164314.1
EG025790.1
MHC04642_1
FC546934.1
SRC00221_1
Tcol_isotig01029
SR02975
JI477231.1
FC549902.1
Oden_isotig19625
Tcol_isotig01026
HGC03554_1
Hbac_isotig02418
BXC04562_1
HG08667
JI483114.1
Dviv_isotig34678
Dviv_isotig24725
BE132483.1
Tcol_isotig01028
Oden_isotig20939
BMC08007_1
FC811643.1
ACC11155_1
FC539854.1
TMC01209_1
FC544571.1
Acan_isotig09625
OVC06302_1
MHC02045_1
HG03934
SSC03336_1
AYC02189_1
SS03359
HBC27380_1
GR13763
Acan_isotig14296
MH04635
TM01527
FC550711.1
GRC03003_1
FC817209.1
AE03940
Tcol_isotig01027
SRC01551_1
JI471799.1
Experimental_infoMicroarray_resultsGPL14142_CBN11394_2342-2401_0.842_94_A
GPL14142_CBN11394_2860-2919_0.878_54_B
GPL14142_CBN11394_3717-3776_0.952_5_C
MethodGene