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WormBase Tree Display for Gene: WBGene00152741

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Name Class

WBGene00152741SMapS_parentSequenceCbre_Contig28
IdentityVersion4
NameCGC_nameCbn-efhd-1From_analysisInferred_from_orthology
Sequence_nameCBN14016
Molecular_nameCBN14016
CBN14016.1
CN30937
Public_nameCbn-efhd-1
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:51WBPerson4055EventImportedfrom NGASP
201 Oct 2019 10:47:49WBPerson1983Name_changeCGC_nameCbn-efhd-1
304 Jun 2020 14:38:22WBPerson1983Name_changeCGC_nameRemoved
428 Jul 2021 11:12:29WBPerson1983Name_changeCGC_nameCbn-efhd-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classefhd
RNASeq_FPKMWBls:000000217.4812From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
22.3642From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
23.3825From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
25.7294From_analysisRNASeq.brenneri.WBls:0000002.control_mean
25.7581From_analysisRNASeq.brenneri.WBls:0000002.control_median
28.1337From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
28.6322From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
35.603From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
46.8354From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
54.8622From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
WBls:0000004162.358From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
324.716From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
27.4014From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
37.184From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
42.2488From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
44.1579From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
48.8666From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
WBls:000003818.6234From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
19.1192From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
19.6151From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:000004111.9625From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
16.1167From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
17.4726From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
18.5359From_analysisRNASeq.brenneri.WBls:0000041.control_median
193.028From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
19.5991From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
223.706From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
26.9705From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
31.5537From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
35.9325From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
38.852From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
4.08154From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
44.7477From_analysisRNASeq.brenneri.WBls:0000041.control_mean
79.7076From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
8.28914From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
8.69193From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
WBls:000010119.6151From_analysisRNASeq.brenneri.total_over_all_stages.control_median
43.1036From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00213549
OrthologWBGene00012980Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00213240Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00195141Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g6470Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10050Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g7363Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g5658Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g12382Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP32.g17286Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g14026Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g17411Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g6311Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00006.g523Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_II.g5949Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g9745Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01996.g24283Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_10456Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_005285Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08803Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_20324000Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00025804Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00117789Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00226899Brugia malayiFrom_analysisWormBase-Compara
chrII_pilon.g6497Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00247020Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00285188Trichuris murisFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity. Is an ortholog of C. elegans efhd-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN14016
Corresponding_CDS_historyCBN14016:np197
Corresponding_transcriptCBN14016.1
Other_sequenceCBC06436_1
JI461304.1
XI00671
BMC01850_1
ACC12732_1
CJC02307_1
AS10653
OOC03275_1
Dviv_isotig27959
Name_isotig02026
FE914304.1
FE913235.1
CR00963
Oden_isotig09634
ACC34331_1
ES410203.1
Tcol_isotig08982
Acan_isotig09414
CRC05824_1
XIC01601_1
EX534516.1
PPC01398_1
EX558394.1
HBC24671_1
ASC02973_1
JI168002.1
ASC03012_1
Hbac_isotig03506
EX537565.1
FE912461.1
PP02292
Oden_isotig09635
CR09265
FE912978.1
Tcir_isotig07585
Tcol_isotig08983
Experimental_infoMicroarray_resultsGPL14142_CBN14016_605-664_0.901_5_B
GPL14142_CBN14016_684-743_0.781_57_C
GPL14142_CBN14016_773-832_0.901_6_A
Remark[200603 pad] The CGC name Cbn-efhd-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene