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WormBase Tree Display for Gene: WBGene00158651

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Name Class

WBGene00158651SMapS_parentSequenceCbre_Contig180
IdentityVersion1
NameCGC_nameCbn-unc-112From_analysisInferred_from_orthology
Sequence_nameCBN19926
Molecular_nameCBN19926
CBN19926.1
CN00969
Other_nameCBN19926
Public_nameCbn-unc-112
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-unc-112
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000000210.1561From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
12.0549From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
12.5754From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
14.4602From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
6.7481From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
6.9514From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
7.13026From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
7.87993From_analysisRNASeq.brenneri.WBls:0000002.control_mean
7.92662From_analysisRNASeq.brenneri.WBls:0000002.control_median
8.72298From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
WBls:000000414.7719From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
29.5439From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
65.4253From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
73.3826From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
82.5462From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
87.6097From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
98.2332From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
WBls:000003861.4555From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
62.736From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
64.0166From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:000004111.5355From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
12.4455From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
14.1835From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
19.9113From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
21.554From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
22.27From_analysisRNASeq.brenneri.WBls:0000041.control_mean
24.7446From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
24.7526From_analysisRNASeq.brenneri.WBls:0000041.control_median
24.7607From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
25.466From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
30.0504From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
30.5728From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
30.7396From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
30.8598From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
33.3116From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
46.1854From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
WBls:000010114.1835From_analysisRNASeq.brenneri.total_over_all_stages.control_median
19.0366From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00218279
OrthologWBGene00006836Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00027203Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00064391Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00135987Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g1990Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10368Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g1173Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g7370Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17736Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g18666Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g15624Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g2031Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g14026Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g23708Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g7480Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g23667Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00125.g5037Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_04890.g19193Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_12012.g23526Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-112Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g15915Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00361.g10114Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_02618.g27253Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_11922Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_017456Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00267Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g23283Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50349400Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00097594Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00223076Brugia malayiFrom_analysisWormBase-Compara
chrV_pilon.g16592Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00243942Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00257862Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00295078Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00193349Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00193815Caenorhabditis brenneriFrom_analysisTreeFam
Structured_descriptionAutomated_descriptionPredicted to be involved in integrin-mediated signaling pathway. Is an ortholog of C. elegans unc-112. In C. elegans, unc-112 is involved in several processes, including muscle cell cellular homeostasis; positive regulation of supramolecular fiber organization; and regulation of engulfment of apoptotic cell.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN19926
Corresponding_transcriptCBN19926.1
Other_sequencePTC04724_1
HC05762
CRC05378_1
EX566244.1
EX564760.1
Oden_isotig18734
PSC03827_1
HSC00120_1
HSC00534_1
PP00302
EX500193.1
FC547602.1
HCC07634_1
TCC00624_1
AYC03133_1
ES566133.1
JI168192.1
HGC06699_1
HSC00120_2
MCC02496_1
HG06612
HS00311
GW413099.1
TX01140
HGC10375_1
SS00610
CR05312
Hbac_isotig02542
SSC04146_1
EX555434.1
SS01809
EX559344.1
PPC00189_1
EX557748.1
TSC12039_1
HBC12983_1
GR12330
HSC01427_1
MC02818
HSC00781_1
CR01259
CJC03668_1
PT00156
HS01302
CRC02526_1
ACC12187_1
BXC04442_1
HS00278
SSC00560_1
HG01235
EX008953.1
Oden_isotig25626
AE03393
GP03063
GPC02282_1
EX008876.1
GE625592.1
EX911296.1
Dviv_isotig29289
Dviv_isotig27248
Dviv_isotig17398
EX542526.1
Dviv_isotig17399
HG00162
HBC20401_1
FF679192.1
HS01334
HGC03745_1
EX557757.1
Name_isotig01475
Acan_isotig07556
EX557108.1
HBC02730_1
HG00669
HS00394
HS00389
EX013235.1
HSC00881_1
Tcol_isotig24858
Tcol_isotig10459
FF678244.1
GRC01190_1
Experimental_infoMicroarray_resultsGPL14142_CBN19926_1489-1548_0.904_4_C
GPL14142_CBN19926_1805-1864_0.908_3_A
GPL14142_CBN19926_1841-1900_0.842_51_B
MethodGene