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WormBase Tree Display for Gene: WBGene00191184

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Name Class

WBGene00191184SMapS_parentSequenceCbre_Contig0
IdentityVersion2
NameCGC_nameCbn-unc-2From_analysisInferred_from_orthology
Sequence_nameCBN29219
Molecular_nameCBN29219
CBN29219.1
CN33554
Public_nameCbn-unc-2
SpeciesCaenorhabditis brenneri
HistoryVersion_change120 May 2009 11:55:52WBPerson1847EventCreated
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbn-unc-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000020.645816From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
1.20684From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
1.21446From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
1.24398From_analysisRNASeq.brenneri.WBls:0000002.control_median
1.26414From_analysisRNASeq.brenneri.WBls:0000002.control_mean
1.27349From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
1.55554From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
2.05623From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
2.09432From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
2.59474From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
WBls:000000412.1027From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
1.35315From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
6.72792From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:000002418.6From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
23.8124From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
29.7787From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
31.7191From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
36.6029From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
WBls:00000383.0609From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
3.32313From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
3.58536From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:00000410.453346From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
0.571054From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
0.919885From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
1.02475From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
1.05833From_analysisRNASeq.brenneri.WBls:0000041.control_median
1.09192From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
1.34392From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
1.45053From_analysisRNASeq.brenneri.WBls:0000041.control_mean
1.48135From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
1.8489From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
2.30233From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
2.78244From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
3.21768From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
6.17092From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
WBls:00001011.27349From_analysisRNASeq.brenneri.total_over_all_stages.control_median
1.80491From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00226896
00226897
00226898
00226899
00226900
00226901
00226902
OrthologWBGene00006742Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00025194Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00058196Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00122802Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g3405Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10900Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14625Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g18855Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15739Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g21876Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g5702Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g17752Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g1279Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g12541Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00571.g12364Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-2Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold582.g4655Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00075.g3463Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01034Caenorhabditis latensFrom_analysisWormBase-Compara
Sp34_X0097300Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00118298Pristionchus pacificusFrom_analysisWormBase-Compara
chrX_pilon.g18655Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00140494Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00147845Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00153171Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00153792Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00154155Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00163993Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00190957Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable voltage-gated calcium channel activity. Predicted to be involved in calcium ion transmembrane transport. Predicted to be located in membrane. Predicted to be part of voltage-gated calcium channel complex. Is an ortholog of C. elegans unc-2. In C. elegans, unc-2 is involved in several processes, including determination of left/right asymmetry in nervous system; negative regulation of transforming growth factor beta receptor signaling pathway; and response to heat.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN29219
Corresponding_transcriptCBN29219.1
Other_sequenceJI167392.1
JI470515.1
MHC00234_1
JO471464.1
JI168000.1
JI182171.1
Hbac_isotig03849
MH03151
JI168646.1
JI166832.1
JI247657.1
MH04170
JI473851.1
JI469752.1
JI461663.1
MHC00657_1
Experimental_infoMicroarray_resultsGPL14142_CBN29219_2048-2107_0.782_167_B
GPL14142_CBN29219_2334-2393_0.834_78_A
GPL14142_CBN29219_3794-3853_0.964_1_C
MethodGene