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WormBase Tree Display for Gene: WBGene00191347

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Name Class

WBGene00191347SMapS_parentSequenceCbre_Contig147
IdentityVersion2
NameCGC_nameCbn-itr-1.1From_analysisInferred_from_orthology
Sequence_nameCBN29382
Molecular_nameCBN29382
CBN29382.1
CN34044
Public_nameCbn-itr-1.1
SpeciesCaenorhabditis brenneri
HistoryVersion_change120 May 2009 11:55:52WBPerson1847EventCreated
220 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameCbn-itr-1.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classitr
RNASeq_FPKMWBls:00000020.88338From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
1.69929From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
2.00506From_analysisRNASeq.brenneri.WBls:0000002.control_mean
2.03227From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
2.0445From_analysisRNASeq.brenneri.WBls:0000002.control_median
2.05673From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
2.3239From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
2.43686From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
2.74834From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
5.86986From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
WBls:00000040.333658From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0.667317From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:000002415.5601From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
21.2892From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
26.1179From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
26.4388From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
33.0378From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
WBls:00000386.23184From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
6.30355From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
6.37526From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:00000410From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
3.51125From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
3.54783From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
4.09755From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
4.7071From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
5.11018From_analysisRNASeq.brenneri.WBls:0000041.control_mean
5.16806From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
5.27334From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
5.47541From_analysisRNASeq.brenneri.WBls:0000041.control_median
5.67747From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
5.67946From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
5.97684From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
6.20887From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
7.2049From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
7.21159From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
8.63496From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
8.86368From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
WBls:00001013.54783From_analysisRNASeq.brenneri.total_over_all_stages.control_median
3.71251From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00227092
00227093
00227094
00227095
00227096
00227097
00227098
00227099
00227100
00227101
OrthologWBGene00002173Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00028294Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00074864Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00130571Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g11401Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g3420Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g16161Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g17261Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g6300Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g915Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g16163Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g837Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g16786Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g17340Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g5399Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g7890Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g1395Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00211.g7110Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00623.g12902Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_03927.g18484Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_10274.g22555Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_13775.g24375Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-itr-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g7968Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g7969Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00007.g529Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_12881Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_013996Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02938Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g15545Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40306000Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40306300Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00062475Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00115426Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00224049Brugia malayiFrom_analysisWormBase-Compara
chrIV_pilon.g10889Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00241277Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00267095Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00286523Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00192195Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00163093Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00193580Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00193883Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00193891Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable inositol 1,4,5 trisphosphate binding activity and inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity. Predicted to be involved in calcium ion transmembrane transport. Predicted to be located in endoplasmic reticulum and membrane. Is an ortholog of C. elegans itr-1. In C. elegans, itr-1 is involved in several processes, including determination of adult lifespan; multicellular organism reproduction; and system process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN29382
Corresponding_transcriptCBN29382.1
Other_sequenceMC03292
Tcir_isotig20831
Dviv_isotig10910
FC548184.1
JI482418.1
MJ02568
MJC01632_1
Dviv_isotig29444
FC539374.1
FC539920.1
SS01699
FC543835.1
Tcir_isotig27539
Dviv_isotig10908
EX534553.1
SR00107
FC543797.1
JI163996.1
ACC08576_1
EY464429.1
SSC04209_1
Dviv_isotig10909
ACC38314_1
FC555743.1
MCC02947_1
CR09936
JI171809.1
BUC01262_1
EX562212.1
Acan_isotig16929
CRC02506_1
Experimental_infoMicroarray_resultsGPL14142_CBN29382_8080-8139_0.773_284_C
GPL14142_CBN29382_8345-8404_0.927_11_B
GPL14142_CBN29382_8517-8576_0.913_19_A
MethodGene