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WormBase Tree Display for Gene: WBGene00237392

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Name Class

WBGene00237392SMapS_parentSequenceOVOC_OM1b_7
IdentityVersion2
NameCGC_nameOvo-lron-5From_analysisInferred_from_orthology
Sequence_nameOVOC583
Molecular_nameOVOC583
OVOC583.1
OVP07230
Public_nameOvo-lron-5
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:32WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:33WBPerson4055Name_changeCGC_nameOvo-lron-5
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlron
RNASeq_FPKMWBls:00001011.47646From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
1.8418From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:00001040.299227From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
0.302102From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
0.605582From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
0.633946From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
1.13146From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
1.31684From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
1.63609From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
1.6687From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
1.91323From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
1.93048From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
1.94807From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
0From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
2.13424From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
3.04007From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
3.73698From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
8.5906From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
WBls:00001071.28384From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001082.72607From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
3.13975From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
3.18721From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
3.50596From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:00006640.368337From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
0.429696From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
0.491055From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
OrthologWBGene00037524Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00223542Brugia malayiFrom_analysisWormBase-Compara
WBGene00008656Caenorhabditis elegansFrom_analysisWormBase-Compara
CBOVI.g5141Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g2167Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g11946Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13569Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g14736Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g15552Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g6508Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g5504Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g10889Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g8625Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g8626Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g1270Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00212.g7116Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-lron-5Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold478.g1768Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_04510.g33108Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_14933Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_010062Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03856Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g23375Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30069200Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00061740Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00104920Pristionchus pacificusFrom_analysisWormBase-Compara
chrIII_pilon.g7493Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00258647Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00236990Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00237448Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241963Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241964Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246063Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246070Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246449Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248268Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Leucine-rich repeat; Leucine-rich repeat domain superfamily; Leucine rich repeat; and Leucine-rich repeat, typical subtype. Is an ortholog of C. elegans lron-5.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC583
Corresponding_transcriptOVOC583.1
Other_sequenceJI215722.1
JI176266.1
MethodGene