WormBase Tree Display for Gene: WBGene00240707
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WBGene00240707 | SMap | S_parent | Sequence | OVOC_OM2_1 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | Ovo-hlb-1 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | OVOC3898 | ||||||||
Molecular_name | OVOC3898 | ||||||||
OVOC3898.1 | |||||||||
OVP11911 | |||||||||
Public_name | Ovo-hlb-1 | ||||||||
Species | Onchocerca volvulus | ||||||||
History | Version_change | 1 | 29 Nov 2013 15:05:33 | WBPerson3111 | Event | Imported | MAKER import | ||
2 | 24 Jan 2014 16:01:31 | WBPerson4055 | Name_change | CGC_name | Ovo-hlb-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | hlb | ||||||||
RNASeq_FPKM | WBls:0000101 | 4.44525 | From_analysis | RNASeq.ovolvulus.total_over_all_stages.control_median | |||||
7.98802 | From_analysis | RNASeq.ovolvulus.total_over_all_stages.control_mean | |||||||
WBls:0000104 (16) | |||||||||
WBls:0000107 | 7.86354 | From_analysis (3) | |||||||
WBls:0000108 | 24.9364 | From_analysis | RNASeq.ovolvulus.WBls:0000108.control_mean | ||||||
29.177 | From_analysis (2) | ||||||||
41.2431 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | |||||||
4.38922 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | |||||||
WBls:0000664 | 11.8955 | From_analysis (2) | |||||||
14.0691 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | |||||||
9.72194 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | |||||||
Ortholog (28) | |||||||||
Paralog | WBGene00241916 | Onchocerca volvulus | From_analysis | WormBase-Compara | |||||
Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Sterile alpha motif domain; Sterile alpha motif/pointed domain superfamily; LAR-interacting protein, Liprin; Liprin-beta; and SAM domain (Sterile alpha motif). Is an ortholog of C. elegans hlb-1. In C. elegans, hlb-1 is involved in several processes, including neuromuscular junction development; positive regulation of locomotion; and regulation of pharyngeal pumping. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | OVOC3898 | |||||||
Corresponding_transcript | OVOC3898.1 | ||||||||
Other_sequence (86) | |||||||||
Method | Gene |