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WormBase Tree Display for Gene: WBGene00240707

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Name Class

WBGene00240707SMapS_parentSequenceOVOC_OM2_1
IdentityVersion2
NameCGC_nameOvo-hlb-1From_analysisInferred_from_orthology
Sequence_nameOVOC3898
Molecular_nameOVOC3898
OVOC3898.1
OVP11911
Public_nameOvo-hlb-1
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:31WBPerson4055Name_changeCGC_nameOvo-hlb-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhlb
RNASeq_FPKMWBls:00001014.44525From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
7.98802From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:00001040.765592From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
1.04626From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
1.05763From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
1.38015From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
1.44804From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
20.2091From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
2.70276From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
3.13306From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
4.11704From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
4.24985From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
4.50128From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
4.61817From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
5.04253From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
5.82995From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
6.38014From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
7.40915From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
WBls:00001077.86354From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010824.9364From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
29.177From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
41.2431From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
4.38922From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:000066411.8955From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
14.0691From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
9.72194From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
OrthologWBGene00156280Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00029427Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00228814Brugia malayiFrom_analysisWormBase-Compara
WBGene00011904Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00130091Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g3867Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g11882Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g16925Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g18094Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g20414Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g11171Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g6328Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g10435Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g26184Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g10967Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00459.g11096Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-hlb-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g22027Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00192.g6690Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01554Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_025777Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00549Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g16989Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0118920Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00065310Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrX_pilon.g20486Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00265579Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00294266Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00241916Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Sterile alpha motif domain; Sterile alpha motif/pointed domain superfamily; LAR-interacting protein, Liprin; Liprin-beta; and SAM domain (Sterile alpha motif). Is an ortholog of C. elegans hlb-1. In C. elegans, hlb-1 is involved in several processes, including neuromuscular junction development; positive regulation of locomotion; and regulation of pharyngeal pumping.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC3898
Corresponding_transcriptOVOC3898.1
Other_sequenceJI212609.1
CR12068
MH08093
MP00546
FC814213.1
SC01034
JI176925.1
Acan_isotig01738
Acan_isotig08726
CRC07238_1
MIC06989_1
Name_isotig04644
ASC38805_1
MI09120
TSC06760_1
MJ04068
Acan_isotig19339
EL888327.1
CR01338
HS01531
TX01116
MP00845
JI228137.1
EL889174.1
JI220038.1
ASC05841_1
CV198807.1
MH00231
CV198916.1
Name_isotig02638
GO240306.1
JI181709.1
MA02994
FC810699.1
TX01049
JK315550.1
GE638660.1
TX01595
Oden_isotig19150
ACC14045_1
Hbac_isotig01518
PPC00808_2
BMC06229_1
JI165434.1
Dviv_isotig18353
CJC03013_1
Dviv_isotig18354
MP00431
JI255944.1
Tcol_isotig17975
Acan_isotig00803
MHC00481_1
TSC13123_1
GR979049.1
MH04592
JI171388.1
TX01327
ES584516.1
FG354059.1
AS08872
HCC04691_1
GO250399.1
CRC12210_1
EY467770.1
ES564477.1
JI214991.1
JI163904.1
BMC16593_1
HC08469
Oden_isotig24834
JI164155.1
MH10590
MP01768
TV00488
ASC08299_1
ES672330.1
JI177134.1
GO253145.1
ES563618.1
JK315934.1
TCC00712_1
JI181305.1
JI218537.1
CV200285.1
FE918005.1
JI247771.1
MethodGene