Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00241277

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00241277SMapS_parentSequenceOVOC_OM2_21
IdentityVersion2
NameCGC_nameOvo-itr-1From_analysisInferred_from_orthology
Sequence_nameOVOC4468
Molecular_nameOVOC4468
OVOC4468.1
OVP02488
Public_nameOvo-itr-1
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:34WBPerson4055Name_changeCGC_nameOvo-itr-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classitr
RNASeq_FPKMWBls:00001012.63195From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
3.15298From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:00001040.208093From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
0.313351From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
0.427835From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
0.460516From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
14.7617From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
1.69977From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
2.41017From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
2.68084From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
2.68775From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
2.92229From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
2.99965From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
3.12826From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
3.31862From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
3.52548From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
6.21378From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
8.64953From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
WBls:00001072.58306From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001082.22059From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
4.38477From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
4.64608From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
6.28765From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:00006640.327721From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
0.372959From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
0.418198From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
GO_annotation00255255
00255256
00255257
00255258
00255259
00255260
00255261
00255262
00255263
00255264
OrthologWBGene00191347Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192195Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00028294Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00224049Brugia malayiFrom_analysisWormBase-Compara
WBGene00002173Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00130571Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g11401Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g3420Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g16161Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g17261Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g6300Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g915Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g16163Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g837Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g16786Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g17340Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g5399Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g7890Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g1395Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00211.g7110Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00623.g12902Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_03927.g18484Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_09229.g21956Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_10274.g22555Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_13775.g24375Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-itr-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g7968Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g7969Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00007.g529Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_12881Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_013996Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02938Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g15545Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40306000Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_40306300Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00062475Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00074864Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00115426Pristionchus pacificusFrom_analysisWormBase-Compara
chrIV_pilon.g10889Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00267095Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00286523Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00245273Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable inositol 1,4,5 trisphosphate binding activity and inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity. Predicted to be involved in calcium ion transmembrane transport. Predicted to be located in endoplasmic reticulum and membrane. Is an ortholog of C. elegans itr-1. In C. elegans, itr-1 is involved in several processes, including determination of adult lifespan; multicellular organism reproduction; and system process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC4468
Corresponding_transcriptOVOC4468.1
Other_sequenceCBC00675_1
JI460761.1
ACC12319_1
Tcir_isotig20831
Dviv_isotig10910
FC555458.1
JI480824.1
BMC04212_1
FC548184.1
JI482418.1
MJ02568
CBC06754_1
FC540678.1
AS17267
JI479726.1
MJC01632_1
JI459555.1
BMC03853_1
HC08996
FC539374.1
EY461626.1
JI240257.1
FC539920.1
SS01699
FC811894.1
BMC00372_1
FC543835.1
Dviv_isotig27495
Tcir_isotig27539
BMC11708_1
Dviv_isotig10908
JI473646.1
EX534553.1
SR00107
Hbac_isotig04893
ACC25850_1
FC555123.1
FC543797.1
DI01771
JI163996.1
DIC01433_1
ACC08576_1
EY464429.1
GO251023.1
Tcol_isotig01450
Oden_isotig17493
FC540632.1
SSC04209_1
SRC01589_1
BMC18609_1
Dviv_isotig10909
FC539266.1
EX537648.1
ACC38314_1
FC555743.1
MCC02947_1
CR09936
MH05707
JI171809.1
BUC01262_1
EX562212.1
MHC02162_1
BM01417
Acan_isotig16929
JI478584.1
CRC02506_1
Acan_isotig08817
FC817481.1
EX546896.1
MethodGene