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WormBase Tree Display for Gene: WBGene00241916

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Name Class

WBGene00241916SMapS_parentSequenceOVOC_OM2_53
IdentityVersion2
NameCGC_nameOvo-syd-2From_analysisInferred_from_orthology
Sequence_nameOVOC5107
Molecular_nameOVOC5107
OVOC5107.1
OVP09612
Public_nameOvo-syd-2
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:30WBPerson4055Name_changeCGC_nameOvo-syd-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsyd
RNASeq_FPKMWBls:00001013.78447From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
5.308From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:0000104 (16)
WBls:00001072.36399From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001081.18891From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
13.7837From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
14.8944From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
9.95567From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
WBls:00006644.44361From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
6.12537From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
7.80713From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Ortholog (32)
ParalogWBGene00240707Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Sterile alpha motif domain; Sterile alpha motif/pointed domain superfamily; LAR-interacting protein, Liprin; Liprin-alpha; and SAM domain (Sterile alpha motif). Is an ortholog of C. elegans syd-2. In C. elegans, syd-2 is involved in several processes, including anterograde synaptic vesicle transport; egg-laying behavior; and positive regulation of anterograde synaptic vesicle transport.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC5107
Corresponding_transcriptOVOC5107.1
Other_sequence (33)
MethodGene