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WormBase Tree Display for Gene: WBGene00240707

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Name Class

WBGene00240707SMapS_parentSequenceOVOC_OM2_1
IdentityVersion2
NameCGC_nameOvo-hlb-1From_analysisInferred_from_orthology
Sequence_nameOVOC3898
Molecular_nameOVOC3898
OVOC3898.1
OVP11911
Public_nameOvo-hlb-1
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:31WBPerson4055Name_changeCGC_nameOvo-hlb-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhlb
RNASeq_FPKMWBls:00001014.44525From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
7.98802From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:0000104 (16)
WBls:00001077.86354From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010824.9364From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
29.177From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
41.2431From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
4.38922From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:000066411.8955From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
14.0691From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
9.72194From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
Ortholog (28)
ParalogWBGene00241916Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Sterile alpha motif domain; Sterile alpha motif/pointed domain superfamily; LAR-interacting protein, Liprin; Liprin-beta; and SAM domain (Sterile alpha motif). Is an ortholog of C. elegans hlb-1. In C. elegans, hlb-1 is involved in several processes, including neuromuscular junction development; positive regulation of locomotion; and regulation of pharyngeal pumping.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC3898
Corresponding_transcriptOVOC3898.1
Other_sequence (86)
MethodGene