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WormBase Tree Display for Gene: WBGene00245235

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Name Class

WBGene00245235SMapS_parentSequenceOVOC_OM3_75
IdentityVersion2
NameCGC_nameOvo-ral-1From_analysisInferred_from_orthology
Sequence_nameOVOC8426
Molecular_nameOVOC8426
OVOC8426.1
OVP14129
Public_nameOvo-ral-1
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:33WBPerson4055Name_changeCGC_nameOvo-ral-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classral
RNASeq_FPKMWBls:000010129.833From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
30.768From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:000010413.2667From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
13.5427From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
13.6071From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
14.2261From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
14.6435From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
19.6471From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
20.8662From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
23.556From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
26.8943From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
2.91435From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
31.2556From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
32.3901From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
32.5244From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
35.427From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
40.3237From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
41.8106From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
WBls:000010749.4041From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:0000108101.473From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
49.246From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
63.7673From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
71.4954From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
WBls:000066429.7566From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
29.833From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
29.9093From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
GO_annotation00259122
00259123
00259124
00259125
OrthologWBGene00144625Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00035837Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00227030Brugia malayiFrom_analysisWormBase-Compara
WBGene00021811Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00136469Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g5920Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g16072Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g1153Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g11673Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g22643Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g17585Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g12487Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g14179Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g17648Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g7627Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g3557Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00425.g10693Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-ral-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g20654Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01046.g17916Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_08072Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_11214Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_011374Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_011438Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08468Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g20638Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30323800Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00066506Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00090497Pristionchus pacificusFrom_analysisWormBase-Compara
chrIII_pilon.g7233Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00260675Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00288889Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00237130Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00237174Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241099Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241157Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241806Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245121Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245753Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246647Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248650Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248932Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable GTP binding activity and GTPase activity. Predicted to be involved in signal transduction. Predicted to be located in membrane. Is an ortholog of C. elegans ral-1. In C. elegans, ral-1 is involved in several processes, including determination of adult lifespan; multivesicular body assembly; and positive regulation of vulval development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC8426
Corresponding_CDS_historyOVOC8426:ov243
Corresponding_transcriptOVOC8426.1
Other_sequenceBF064393.1
OVC07920_1
JI171536.1
CR02552
FC817104.1
FC819225.1
ES570160.1
SRC09599_1
CR08866
PP00843
JI177551.1
TX01511
HG07610
CJC01680_1
JI177833.1
SSC00595_1
FC811624.1
TVC01045_1
MHC06673_1
MH09400
SSC03880_1
HG04646
TX01078
EL889751.1
MC00652
CRC03755_1
GT570872.1
MCC00401_1
HGC02914_1
TCC02438_1
CRC03785_1
SS00944
GO252752.1
TX01627
TX01307
TX01496
Oden_isotig17499
FC812856.1
Acan_isotig15728
PPC01958_1
CR11299
TX01236
EX915726.1
JI177500.1
FC811551.1
EX014993.1
SR00906
TX01610
TV01259
TX01432
HCC08009_1
CBC04175_1
TX01463
ES561243.1
JI465357.1
GT571293.1
GO249717.1
TX01129
Dviv_isotig12577
JI178138.1
FC819682.1
GT571237.1
Hbac_isotig00502
EV850439.1
GQ150476.1
JI169766.1
EV850889.1
TSC06845_1
TX01123
FC817487.1
DVC00026_1
GT571343.1
FC816854.1
CRC11514_1
SRC01996_1
FC813403.1
Tcol_isotig08695
TX01529
TX01687
JO469263.1
XI00597
TX01503
SR03341
FC818555.1
JI477729.1
CR02916
CR11300
Hbac_isotig00503
XIC03035_1
Dviv_isotig12578
EV851693.1
ACC23393_1
EL889669.1
Acan_contig04144
GT570796.1
EX558691.1
EL888796.1
JI182836.1
JI479864.1
XIC03033_1
FE913218.1
EX013280.1
HBC02517_1
SRC01549_1
CV199226.1
DA00646
ReferenceWBPaper00055184
WBPaper00056089
WBPaper00056193
MethodGene