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WormBase Tree Display for Gene: WBGene00245704

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Name Class

WBGene00245704SMapS_parentSequenceOVOC_OM3_79
IdentityVersion2
NameCGC_nameOvo-cbn-1From_analysisInferred_from_orthology
Sequence_nameOVOC8895
Molecular_nameOVOC8895
OVOC8895.1
OVP09420
Public_nameOvo-cbn-1
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:34WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:33WBPerson4055Name_changeCGC_nameOvo-cbn-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcbn
RNASeq_FPKMWBls:0000101133.869From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
35.7654From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
WBls:00001040.141875From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
11.4988From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
11.7836From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
139.644From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
16.0923From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
168.287From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
35.7501From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
35.7806From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
392.317From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
39.2971From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
43.2156From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
492.096From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
599.819From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
620.498From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
77.6977From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
8.66711From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
WBls:00001076.06087From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:0000108134.719From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
1.58058From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
357.483From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
45.0927From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:00006641.46152From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
5.30106From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
9.14061From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
GO_annotation00259641
OrthologWBGene00146311Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00159238Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00029224Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00224976Brugia malayiFrom_analysisWormBase-Compara
WBGene00019285Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00135731Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g7173Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g6764Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g21313Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g18320Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17505Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g25609Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g876Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g8425Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g24377Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g22511Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_11529.g23298Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_16517.g25387Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-cbn-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold605.g5604Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold605.g5605Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00467.g11757Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_14342Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_008141Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08198Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g11363Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20002300Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00064708Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00099836Pristionchus pacificusFrom_analysisWormBase-Compara
chrII_pilon.g3092Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00259282Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00237739Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00240729Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241338Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00243139Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00243314Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00243886Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00243974Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245287Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246416Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246593Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246924Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247328Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00249652Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity. Is an ortholog of C. elegans cbn-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC8895
Corresponding_transcriptOVOC8895.1
Other_sequenceAF153720.1
AI317886.1
BI097391.1
OVC02120
CSC00653_1
Dviv_isotig08909
FE908497.1
PPC19610_1
FE907350.1
MJ03698
BM00905
OF01288
FD517126.1
BMC13216_1
Dviv_isotig08912
FE908101.1
PPC13861_1
FE905472.1
Oden_isotig14681
MJC02791_1
Dviv_isotig08910
FE906692.1
FE905841.1
JI167839.1
JI167304.1
GP00904
FE905765.1
OFC00038_1
Experimental_infoExpression_clusterWBPaper00048881:immunoreactive
ReferenceWBPaper00048750
MethodGene