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WormBase Tree Display for Gene: WBGene00260225

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Name Class

WBGene00260225SMapS_parentSequenceSRAE_chr2
IdentityVersion1
NameSequence_nameSRAE_2000003600
Molecular_nameSRAE_2000003600
SRAE_2000003600.1
SRP00106
Public_nameSRAE_2000003600
SpeciesStrongyloides ratti
HistoryVersion_change101 May 2015 10:45:53WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000067714.4522From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
15.1277From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
16.9695From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
17.4996From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
19.1882From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
19.6115From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
WBls:00006781.55515From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
3.16247From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
5.27046From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
5.40997From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
5.82847From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
6.25986From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
8.23367From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
8.75911From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
WBls:000068026.2489From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006826.91133From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
GO_annotation00268978
00268979
00268980
00268981
00268982
Ortholog (67)
ParalogWBGene00256960Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00258122Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00260019Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00261020Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00264968Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00266103Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00267457Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00267482Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00268116Strongyloides rattiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable carboxy-lyase activity and pyridoxal phosphate binding activity. Predicted to be involved in amino acid metabolic process. Is an ortholog of C. elegans bas-1 and basl-1. In C. elegans, bas-1 is involved in several processes, including locomotion involved in locomotory behavior; phenol-containing compound biosynthetic process; and reproductive behavior.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSSRAE_2000003600
Corresponding_transcriptSRAE_2000003600.1
Other_sequence (47)
Experimental_infoExpression_clusterWBPaper00050919:up_infective-L3_vs_parasitic_mRNA
MethodGene