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WormBase Tree Display for Gene: WBGene00271994

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Name Class

WBGene00271994SMapS_parentSequencePPA_ChrV
IdentityVersion1
NameSequence_namePPA33625
Molecular_namePPA33625
PPA33625.1
PP72753
Public_namePPA33625
SpeciesPristionchus pacificus
HistoryVersion_change124 Nov 2017 16:14:21WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000003210.7983From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001016.14982From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
7.65116From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00280337
Ortholog (98)
ParalogWBGene00089591Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00098113Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00274061Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00283817Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00304839Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable RNA-dependent RNA polymerase activity. Is an ortholog of C. elegans ego-1; rrf-1; and rrf-2. In C. elegans, ego-1 is involved in gamete generation; nuclear pore localization; and regulatory ncRNA-mediated post-transcriptional gene silencing.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA33625
Corresponding_transcriptPPA33625.1
Other_sequenceCR10718
CRC05879_1
CRC01964_1
CR08200
JI164383.1
HQ611977.1
HQ611978.1
Experimental_infoMicroarray_resultsGPL14372_Probes_39767
GPL14372_Probes_39768
GPL14372_Probes_39769
GPL14372_Probes_39771
GPL14372_Probes_39772
GPL14372_Probes_39773
Expression_clusterWBPaper00041207:PP_dauer_up
WBPaper00041466:PP_germline-ablation_regulated
MethodGene